Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G009900.1 | Wheat | cytosol | 97.73 | 99.19 |
| HORVU5Hr1G067090.1 | Barley | cytosol | 98.77 | 95.5 |
| KXG38043 | Sorghum | cytosol | 90.07 | 88.77 |
| Os09t0407950-01 | Rice | plasma membrane | 53.55 | 88.02 |
| Zm00001d033368_P007 | Maize | cytosol | 87.32 | 86.05 |
| Os09t0408000-01 | Rice | cytosol, nucleus | 25.25 | 84.77 |
| VIT_00s1373g00010.t01 | Wine grape | cytosol | 7.54 | 78.85 |
| KRH28498 | Soybean | cytosol | 9.8 | 75.12 |
| GSMUA_Achr10P... | Banana | cytosol | 71.81 | 74.32 |
| Solyc02g090570.2.1 | Tomato | nucleus | 67.16 | 67.65 |
| KRH04644 | Soybean | endoplasmic reticulum | 66.05 | 66.46 |
| Bra036092.1-P | Field mustard | cytosol | 63.36 | 66.45 |
| KRH57890 | Soybean | endoplasmic reticulum | 65.93 | 66.34 |
| AT3G50590.1 | Thale cress | cytosol | 64.77 | 65.49 |
| CDX77930 | Canola | cytosol | 65.2 | 65.24 |
| KRH76964 | Soybean | nucleus | 64.77 | 65.17 |
| CDY17791 | Canola | cytosol | 65.13 | 64.86 |
| VIT_00s0961g00020.t01 | Wine grape | cytosol, extracellular, plastid | 7.11 | 47.54 |
| VIT_00s0783g00010.t01 | Wine grape | cytosol | 15.38 | 44.27 |
| CDY26515 | Canola | cytosol, nucleus, plastid | 6.19 | 39.92 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:22.1.4.4 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19878 | PANTHER:PTHR19878:SF4 | SMART:SM00320 |
| SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS7D01G009600 | EnsemblPlants:TraesCS7D01G009600.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:4631887..4642027
Molecular Weight (calculated)
177193.0 Da
IEP (calculated)
8.476
GRAVY (calculated)
-0.179
Length
1632 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEWETVQHLD LRHAGGRRGA GAPARPLQPH AAAFRASQAI VAVAVGTHVV EFDALTGSKI ALVDLGARVV RMAYSPTSSH VIIAILEDAT IRSCDFATEQ
0101: TLVLHSPEKK TDHVSIDTEV HLALTPLEPI VFFGFHKRMS VTVVGTVEGG RPPTKIKTDL KKPIVNLACH PRLPVFYVAY AEGLVRAYNV QTYAVHYTLQ
0201: LPVDSTIKLM GAGAFGFHPT LEWVFIGDRG GTLLAWDVST ERPNMIGITQ AGSQPITSVS WLPTLKLLVT ISKDGGLQVW KTRVIINNNR QPMETHFFER
0301: AAIETMDITK ILTLQGGEAV YPLPRIKNLA VHPKFNLAAV IFQDMSATEA AKNKAAYTRE GRRQLFAVLQ GARGSTAAVL KEKLLALGSS GILAEHQLQA
0401: QLQEQHLKGQ SKLTISDVAR KAFLHSHFME GHAKSGPISR LPLVTISDPS NLLRDIPVCQ PFHLELNFFN QENRVVQYPV RAFYLDGFNL MAHNLSSGAD
0501: NLYKKLYSTI PSNMECYPKY ISYSPKQHMF LVVFELSGPS GVTHEVVLYW EQTDLQTVNS KGSSIKGRDA TFLGPDDNQY AILEEDRTSL NLYNLKPIAT
0601: KEALENNAAV LEEEENTFAE NPTANPTQKQ GPMQFTFESE VDRIFSSPQE SSLLYVISGK HIGLAKLLTG YRLSTDNGLS ITTKTDGKKF IKLKPNETVL
0701: QVHWQTTLRG PVAGILTNQR VLIASADLDI LSSSSTKYDR GLPSYRSMLW VGPALIFSSA TAISMLGWDN KVRSILSTSF PRSVLLGALN DRLLLVNPTD
0801: INPRQKKGVE IRSCLVGLLE PLLIGFATMQ QHFTQKIDLS EVLYQITSRF DSLRVTPKSL DILSKGPPVC GDLAVSLSQA GPQFTQIMRC NYAIKALRFS
0901: AALSILKDEF LRSRDYPQCP PTSHLFQRFR ELGYACIKYG QFDSAKETFE AIADHESMLD LFICHLNPSA LRRLAQKLEE SGTDPELRRY LERILRVRST
1001: GWTQGVFANF AAESMVPKGP EWAGGNWEIK TPTSMKSIPQ WELAGEVMPY MRTTDAAIPS VIADHIGVYL GVMKGRGNVV EVSEKSLVKA MAAASSENGQ
1101: PASSELALKN KANAAGDSVG DSLARQLGVQ IASADEQAKA AEEFKKTLYG VVDAGSSDED ESTSKTKRIQ IRIRDKPAAP AVDVNKLKEA TKQLGLMAPP
1201: ISRTRSSGTP QEFSQPAGPA PSAAPAMPSG AVDFFGTNTL VAPPQAPTGG TGPVIGGLGV TAGPIPEDFF QNTVPSQQLA NRLPPPGAIL QRMANPESGM
1301: NVGRPVPTQN MMGNVGLPDG GVPPQGPQQG QFPQQQGQFP QQQGIPMNPI GLPDGGVPPQ SQALPSQPQG FQPAAPTPSQ PIDLSALEGP GAAKQAAQPP
1401: APKAVRPGQV PRGAPAAECY RMGLAHLEQN QLTDALNCLD EAFLALAKDQ SREADIKAQA TICAQYKIAV SLLQEIARLQ RVQGAGTLSA KEEMGRLSRH
1501: LASLPIQAKH RINCIRTAIK RNMEVQNFAY AKQMLDLLYS KAPPTKQDEL KSLIDMCVQR GLTNKSIDPF EDPSQFCAVT LSRLSTIGHD VCDLCGAKFS
1601: ALSAPGCVIC GMGSIKRSDA LAGAGPVASP FG
0101: TLVLHSPEKK TDHVSIDTEV HLALTPLEPI VFFGFHKRMS VTVVGTVEGG RPPTKIKTDL KKPIVNLACH PRLPVFYVAY AEGLVRAYNV QTYAVHYTLQ
0201: LPVDSTIKLM GAGAFGFHPT LEWVFIGDRG GTLLAWDVST ERPNMIGITQ AGSQPITSVS WLPTLKLLVT ISKDGGLQVW KTRVIINNNR QPMETHFFER
0301: AAIETMDITK ILTLQGGEAV YPLPRIKNLA VHPKFNLAAV IFQDMSATEA AKNKAAYTRE GRRQLFAVLQ GARGSTAAVL KEKLLALGSS GILAEHQLQA
0401: QLQEQHLKGQ SKLTISDVAR KAFLHSHFME GHAKSGPISR LPLVTISDPS NLLRDIPVCQ PFHLELNFFN QENRVVQYPV RAFYLDGFNL MAHNLSSGAD
0501: NLYKKLYSTI PSNMECYPKY ISYSPKQHMF LVVFELSGPS GVTHEVVLYW EQTDLQTVNS KGSSIKGRDA TFLGPDDNQY AILEEDRTSL NLYNLKPIAT
0601: KEALENNAAV LEEEENTFAE NPTANPTQKQ GPMQFTFESE VDRIFSSPQE SSLLYVISGK HIGLAKLLTG YRLSTDNGLS ITTKTDGKKF IKLKPNETVL
0701: QVHWQTTLRG PVAGILTNQR VLIASADLDI LSSSSTKYDR GLPSYRSMLW VGPALIFSSA TAISMLGWDN KVRSILSTSF PRSVLLGALN DRLLLVNPTD
0801: INPRQKKGVE IRSCLVGLLE PLLIGFATMQ QHFTQKIDLS EVLYQITSRF DSLRVTPKSL DILSKGPPVC GDLAVSLSQA GPQFTQIMRC NYAIKALRFS
0901: AALSILKDEF LRSRDYPQCP PTSHLFQRFR ELGYACIKYG QFDSAKETFE AIADHESMLD LFICHLNPSA LRRLAQKLEE SGTDPELRRY LERILRVRST
1001: GWTQGVFANF AAESMVPKGP EWAGGNWEIK TPTSMKSIPQ WELAGEVMPY MRTTDAAIPS VIADHIGVYL GVMKGRGNVV EVSEKSLVKA MAAASSENGQ
1101: PASSELALKN KANAAGDSVG DSLARQLGVQ IASADEQAKA AEEFKKTLYG VVDAGSSDED ESTSKTKRIQ IRIRDKPAAP AVDVNKLKEA TKQLGLMAPP
1201: ISRTRSSGTP QEFSQPAGPA PSAAPAMPSG AVDFFGTNTL VAPPQAPTGG TGPVIGGLGV TAGPIPEDFF QNTVPSQQLA NRLPPPGAIL QRMANPESGM
1301: NVGRPVPTQN MMGNVGLPDG GVPPQGPQQG QFPQQQGQFP QQQGIPMNPI GLPDGGVPPQ SQALPSQPQG FQPAAPTPSQ PIDLSALEGP GAAKQAAQPP
1401: APKAVRPGQV PRGAPAAECY RMGLAHLEQN QLTDALNCLD EAFLALAKDQ SREADIKAQA TICAQYKIAV SLLQEIARLQ RVQGAGTLSA KEEMGRLSRH
1501: LASLPIQAKH RINCIRTAIK RNMEVQNFAY AKQMLDLLYS KAPPTKQDEL KSLIDMCVQR GLTNKSIDPF EDPSQFCAVT LSRLSTIGHD VCDLCGAKFS
1601: ALSAPGCVIC GMGSIKRSDA LAGAGPVASP FG
0001: MEWATVQHLD LRHVGRGVSK PLQPHTAAFH PSQAVIAVAV GSHIMEFDAL TGCKIASIDI GSPAVRMLYS PTSSNAVVAI LEDCTIRSCD FETEQTCVLH
0101: SPEKRSEHIS SDTEVHLAVT PLQPVVFFGF PKRMSVTVVG TVEGGRAPTK IKTDLKKPIV NIACHPRLPV LYVAYAEGLI RAYNIHTYAV HYTLQLDNTI
0201: KLIGASSFAF HPTLEWIFVG DRRGTLLAWD VSTERPNMIG ITQVGSQPIT SISWLPMLRV LVTVSKDGSL QVWKTRVIIN PNRPSTQTNF FEPAAMESID
0301: IPKILSQQGG EAVYPLPRIK TLEVHPKLNL AALIFANMVG NENTQNRAAQ TREGRKQLFA VLQSARGSSA SVLKEKLSSM GSSGILAEHQ LQALLQEHKG
0401: QSQLTISDIA RKAFLYSHFM EGHAKTAPIS RLPLITVVDT KDQLKDIPVC QPFHLELNFF NKPNRVLHYP VRSFYIEGLN LMAHNLCSGT DNIYKKLYTS
0501: IPGNVEYHSK HIVYSRKRHL FLVVFEFSGA TNEVVLYWEN TGSQLPNSKG STAKGCDAAF IGPNDDQFAI LDEDKTGLSM YILPKLTTME ENEKNLLSEE
0601: NQKKEADPSG IQGPQQFMFE TEVDRVFSTP IESTLMFACN GTQIGLAKLF QGYRLSASDG HYISTQGEGR KSIKLKKHEI ALQVQWQETP RGYVAGILTT
0701: QRVLMVSADF DILASSSTKY DRGLPSFRSL LWVGPALLFS TTTAVCLLGW DGKVRTILSI STPYAALVGA LNDRLLLAHP TDISPKQKKG IEIKSCLVGL
0801: LEPLLIGFST MQQTFEQKVD LSEILYQITT RFDSLRITPR SLDILARSAP VCGDLAVSLA QAGPQFNQVL RCAYAIKALR FSTALSVLKD EFLRSRDYPK
0901: CPPTSLLFQR FRQLGYACIK YGQFDSAKET FEVIGDYESM LDLFICHLNP SAMRRLAQKL EEESGDPELR RYCERILRVR STGWTQGIFA NFAAESMVPK
1001: GPEWGGGNWE IKTPTDMKSI PKWELAGEVM PYMKNEDGTI PSIVADHIGV YLGCVKGRVN VVEIKEDSLV SKPGGLSLLG KPVSDKPLAL PAGESSSMMG
1101: LESLGKQNVA DEQAKAAEEF KKTMYGATGD GSSSDEEGVT KPKKLQIRIR EKPTSTTVDV NKLKEAAKTF KLGDGLGLTM SRTKSINAGS QDLGQMLSQP
1201: SSSTVATTTA PSSASAPVDP FAMSSWTQQP QPVSQPAPPG VAAPIPEDFF QNTIPSVEVA KTLPPPGTYL SKMDQAARAA IAAQGGPNQA NNTPLPDIGL
1301: PDGGVPQQYP QQTSQQPGAP FQTVGLPDGG VRQQYPGQNQ VPSQVPVSTQ PLDLSVLGVP NTGDSGKPPG QPQSPPASVR PGQVPRGAAA PVCFKTGLAH
1401: LEQNQLPDAL SCFDEAFLAL AKDQSRGADI KAQATICAQY KIAVTLLREI LRLQRVQGAS ALSAKDEMAR LSRHLASLPL LAKHRINCIR TAIKRNMEVQ
1501: NYGYSKQMLE LLLSKAPASK QEELRGLVDL CVQRGTSNKS IDPLEDPSQL CSATLSRLST IGYDVCDLCG AKFAALSSPG CIICGMGSIK RSDALAGPAP
1601: VSTPFG
0101: SPEKRSEHIS SDTEVHLAVT PLQPVVFFGF PKRMSVTVVG TVEGGRAPTK IKTDLKKPIV NIACHPRLPV LYVAYAEGLI RAYNIHTYAV HYTLQLDNTI
0201: KLIGASSFAF HPTLEWIFVG DRRGTLLAWD VSTERPNMIG ITQVGSQPIT SISWLPMLRV LVTVSKDGSL QVWKTRVIIN PNRPSTQTNF FEPAAMESID
0301: IPKILSQQGG EAVYPLPRIK TLEVHPKLNL AALIFANMVG NENTQNRAAQ TREGRKQLFA VLQSARGSSA SVLKEKLSSM GSSGILAEHQ LQALLQEHKG
0401: QSQLTISDIA RKAFLYSHFM EGHAKTAPIS RLPLITVVDT KDQLKDIPVC QPFHLELNFF NKPNRVLHYP VRSFYIEGLN LMAHNLCSGT DNIYKKLYTS
0501: IPGNVEYHSK HIVYSRKRHL FLVVFEFSGA TNEVVLYWEN TGSQLPNSKG STAKGCDAAF IGPNDDQFAI LDEDKTGLSM YILPKLTTME ENEKNLLSEE
0601: NQKKEADPSG IQGPQQFMFE TEVDRVFSTP IESTLMFACN GTQIGLAKLF QGYRLSASDG HYISTQGEGR KSIKLKKHEI ALQVQWQETP RGYVAGILTT
0701: QRVLMVSADF DILASSSTKY DRGLPSFRSL LWVGPALLFS TTTAVCLLGW DGKVRTILSI STPYAALVGA LNDRLLLAHP TDISPKQKKG IEIKSCLVGL
0801: LEPLLIGFST MQQTFEQKVD LSEILYQITT RFDSLRITPR SLDILARSAP VCGDLAVSLA QAGPQFNQVL RCAYAIKALR FSTALSVLKD EFLRSRDYPK
0901: CPPTSLLFQR FRQLGYACIK YGQFDSAKET FEVIGDYESM LDLFICHLNP SAMRRLAQKL EEESGDPELR RYCERILRVR STGWTQGIFA NFAAESMVPK
1001: GPEWGGGNWE IKTPTDMKSI PKWELAGEVM PYMKNEDGTI PSIVADHIGV YLGCVKGRVN VVEIKEDSLV SKPGGLSLLG KPVSDKPLAL PAGESSSMMG
1101: LESLGKQNVA DEQAKAAEEF KKTMYGATGD GSSSDEEGVT KPKKLQIRIR EKPTSTTVDV NKLKEAAKTF KLGDGLGLTM SRTKSINAGS QDLGQMLSQP
1201: SSSTVATTTA PSSASAPVDP FAMSSWTQQP QPVSQPAPPG VAAPIPEDFF QNTIPSVEVA KTLPPPGTYL SKMDQAARAA IAAQGGPNQA NNTPLPDIGL
1301: PDGGVPQQYP QQTSQQPGAP FQTVGLPDGG VRQQYPGQNQ VPSQVPVSTQ PLDLSVLGVP NTGDSGKPPG QPQSPPASVR PGQVPRGAAA PVCFKTGLAH
1401: LEQNQLPDAL SCFDEAFLAL AKDQSRGADI KAQATICAQY KIAVTLLREI LRLQRVQGAS ALSAKDEMAR LSRHLASLPL LAKHRINCIR TAIKRNMEVQ
1501: NYGYSKQMLE LLLSKAPASK QEELRGLVDL CVQRGTSNKS IDPLEDPSQL CSATLSRLST IGYDVCDLCG AKFAALSSPG CIICGMGSIK RSDALAGPAP
1601: VSTPFG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J0P2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.