Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G539600.2 | Wheat | cytosol | 98.15 | 98.3 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 96.83 | 96.46 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 94.28 | 94.14 |
| Zm00001d037125_P009 | Maize | cytosol | 71.95 | 77.07 |
| Os06t0728600-00 | Rice | plasma membrane | 52.86 | 76.51 |
| EER89004 | Sorghum | cytosol | 71.25 | 75.2 |
| Zm00001d014862_P002 | Maize | cytosol | 70.02 | 74.81 |
| KRH74100 | Soybean | cytosol | 5.87 | 57.14 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 33.31 | 47.36 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 36.17 | 43.62 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 33.08 | 42.54 |
| KRH14013 | Soybean | endoplasmic reticulum | 34.08 | 42.53 |
| Solyc02g082530.1.1 | Tomato | nucleus | 3.17 | 42.27 |
| Solyc02g082540.2.1 | Tomato | nucleus | 33.69 | 41.92 |
| KRH74101 | Soybean | endoplasmic reticulum | 27.05 | 40.79 |
| KRH60909 | Soybean | endoplasmic reticulum | 33.38 | 40.68 |
| CDY08192 | Canola | cytosol | 36.09 | 40.15 |
| CDY38814 | Canola | cytosol | 35.47 | 40.12 |
| CDX96625 | Canola | cytosol | 30.37 | 40.1 |
| CDY04654 | Canola | cytosol | 36.48 | 40.1 |
| KRH51589 | Soybean | endoplasmic reticulum | 33.31 | 40.06 |
| CDY00394 | Canola | cytosol | 34.85 | 39.42 |
| Bra025842.1-P | Field mustard | cytosol | 30.37 | 39.18 |
| CDY29508 | Canola | cytosol | 29.83 | 38.87 |
| CDY31869 | Canola | cytosol | 29.75 | 38.85 |
| CDY33644 | Canola | cytosol | 29.83 | 38.83 |
| CDY66337 | Canola | cytosol | 29.68 | 38.79 |
| Bra012288.1-P | Field mustard | cytosol | 33.93 | 38.75 |
| CDY01356 | Canola | cytosol | 29.29 | 38.67 |
| CDY01320 | Canola | cytosol | 35.24 | 38.61 |
| CDX96582 | Canola | cytosol | 34.08 | 38.58 |
| Bra012247.1-P | Field mustard | cytosol | 29.75 | 38.5 |
| AT1G20760.1 | Thale cress | cytosol | 30.29 | 38.47 |
| Bra016413.1-P | Field mustard | cytosol | 33.85 | 38.42 |
| PGSC0003DMT400025666 | Potato | cytosol | 4.79 | 38.27 |
| AT1G21630.2 | Thale cress | cytosol | 36.17 | 37.53 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 31.3 | 37.36 |
| Bra017933.1-P | Field mustard | cytosol | 33.77 | 35.44 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 29.75 | 33.92 |
| Solyc04g082560.2.1 | Tomato | cytosol | 31.07 | 32.74 |
| TraesCS7A01G441500.1 | Wheat | cytosol | 7.34 | 17.43 |
| TraesCS2A01G542800.1 | Wheat | cytosol | 7.03 | 16.67 |
| TraesCS6A01G131300.2 | Wheat | cytosol, plastid | 7.5 | 16.3 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | InterPro:IPR000261 |
| InterPro:IPR002048 | PFAM:PF12763 | PFAM:PF13202 | ScanProsite:PS00018 | PFscan:PS50031 | PFscan:PS50222 |
| PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 | EnsemblPlantsGene:TraesCS7A01G553100 |
| EnsemblPlants:TraesCS7A01G553100.1 | TIGR:cd00052 | TIGR:cd00890 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7A:-:725927705..725935995
Molecular Weight (calculated)
139118.0 Da
IEP (calculated)
5.241
GRAVY (calculated)
-0.763
Length
1294 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAAFDAYFR AADLDRDGRI SGQEAVAFFK GSGLPQPVLA QIWTYADKNR TGFLGREDFF NSLKLVTVAQ SGRQLTPDIV KSALFGPAAA KIPAPRINIP
0101: TAAPQPNSVT SPPQPTQALG PRQQTPVVNG SQGPPGPGSS LNPQVPQPGN LVRPPQPPSA NTPQVPQQGH PVRPPQPRAN TSQVPQQGHP VRPPQPPNAN
0201: IPPAQGIAPR PPVGGGLSGL NQTGSTTANL STDWFSGKKS ASPLGGTSQA PVRGASPQVN LGTVGIPTQS STPAAQTPAI TTSVKPNPTD LNILSSQPAV
0301: NDSKALVPLG NGSPSNSSFG VDPFSATPQP TQNSSFPHVS NGLPGSTAHG PAAGPHHPPK PMPPGPVQGI SSLPSHIGQV PPNQPAPKQN QFNSIPSTPG
0401: PLSANIPGGQ MPTNQKQFQA PWPKITQADV RKYMIVFIKV DRDRDGKITG EEARNLFLSW RLPREILRKV WDLSDQDKDG MLSFKEFCFA VYLMERFREQ
0501: RPLPDVLPDG IWAEGISLPS TGQFAENPSG PAPHQSAGFA SRAMQGPHPG MPPSSVKQQH RRPLHFDDDT TPTEPQKPKV PALEKHLVGQ LSKEEQNALE
0601: AKFKEASDAD KKVQELEKEI LDSREKTDYY RTKMQELILY KSRCDNRFNE VSESMSADKR EVQSLSAKYD ERCKKVGDVA SKLSMDEATF REIQAKKLEI
0701: YNSIVKLQKG DGDDEKLQER ANQIQSELEE LVKSLNEQCK RYGLRAKPTT LVELPFGWQP GIQETAAVWD EEWDRFAEDG FSIIKELTVE VEPPAVKESH
0801: PTVEDGKVSS NGVSAATSTE KEDSKTDKTA AAEQTVEPEA TGSNGKAELA KNPPVSPAKK AKDVHTNEPS GTNADSPRAA DSISNDGASD SPVRGDKTNN
0901: RHSWGPSFDH GDDNDSLWNF GDKDGENGDS DLFFGPGGLP PIRTGGSTSA SAFGKEQKPM FDSVPGTPME KPFFDSVPGT PLQKSVFDYS VPSTPMQNSS
1001: FDYSVPSTPM QKSLFDSSVP STPMQRSLFD SSVPSTPMQK SLFDSSVPST PMGNSFYDSF PSTPMQGSLF DSGPGRVESP TAGSTYGGGQ QKGFFDSSVP
1101: STPMYNSSFS PRYSEAGDDS SFDTFSQMDS FGAKDSTSFG QPRDSFSRFD SFGSSAELGS GNDAFGRFDS FSSNADQGGG SSFMRYDSMS SNADQGGGNN
1201: SFMRYDSMSS NAEQGSGGNN SSSFMRYDSM SSNADHDRSN VFARFDSMKS TDSHDQGYSF DDDDPFGTGP FKPSKPSTET SSPTRHGTDK WSAF
0101: TAAPQPNSVT SPPQPTQALG PRQQTPVVNG SQGPPGPGSS LNPQVPQPGN LVRPPQPPSA NTPQVPQQGH PVRPPQPRAN TSQVPQQGHP VRPPQPPNAN
0201: IPPAQGIAPR PPVGGGLSGL NQTGSTTANL STDWFSGKKS ASPLGGTSQA PVRGASPQVN LGTVGIPTQS STPAAQTPAI TTSVKPNPTD LNILSSQPAV
0301: NDSKALVPLG NGSPSNSSFG VDPFSATPQP TQNSSFPHVS NGLPGSTAHG PAAGPHHPPK PMPPGPVQGI SSLPSHIGQV PPNQPAPKQN QFNSIPSTPG
0401: PLSANIPGGQ MPTNQKQFQA PWPKITQADV RKYMIVFIKV DRDRDGKITG EEARNLFLSW RLPREILRKV WDLSDQDKDG MLSFKEFCFA VYLMERFREQ
0501: RPLPDVLPDG IWAEGISLPS TGQFAENPSG PAPHQSAGFA SRAMQGPHPG MPPSSVKQQH RRPLHFDDDT TPTEPQKPKV PALEKHLVGQ LSKEEQNALE
0601: AKFKEASDAD KKVQELEKEI LDSREKTDYY RTKMQELILY KSRCDNRFNE VSESMSADKR EVQSLSAKYD ERCKKVGDVA SKLSMDEATF REIQAKKLEI
0701: YNSIVKLQKG DGDDEKLQER ANQIQSELEE LVKSLNEQCK RYGLRAKPTT LVELPFGWQP GIQETAAVWD EEWDRFAEDG FSIIKELTVE VEPPAVKESH
0801: PTVEDGKVSS NGVSAATSTE KEDSKTDKTA AAEQTVEPEA TGSNGKAELA KNPPVSPAKK AKDVHTNEPS GTNADSPRAA DSISNDGASD SPVRGDKTNN
0901: RHSWGPSFDH GDDNDSLWNF GDKDGENGDS DLFFGPGGLP PIRTGGSTSA SAFGKEQKPM FDSVPGTPME KPFFDSVPGT PLQKSVFDYS VPSTPMQNSS
1001: FDYSVPSTPM QKSLFDSSVP STPMQRSLFD SSVPSTPMQK SLFDSSVPST PMGNSFYDSF PSTPMQGSLF DSGPGRVESP TAGSTYGGGQ QKGFFDSSVP
1101: STPMYNSSFS PRYSEAGDDS SFDTFSQMDS FGAKDSTSFG QPRDSFSRFD SFGSSAELGS GNDAFGRFDS FSSNADQGGG SSFMRYDSMS SNADQGGGNN
1201: SFMRYDSMSS NAEQGSGGNN SSSFMRYDSM SSNADHDRSN VFARFDSMKS TDSHDQGYSF DDDDPFGTGP FKPSKPSTET SSPTRHGTDK WSAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.