Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012247.1-P | Field mustard | cytosol | 99.69 | 97.7 |
| CDY31869 | Canola | cytosol | 95.1 | 94.05 |
| CDY29508 | Canola | cytosol | 90.61 | 89.43 |
| CDY66337 | Canola | cytosol | 90.31 | 89.39 |
| AT1G20760.1 | Thale cress | cytosol | 88.16 | 84.79 |
| CDX96625 | Canola | cytosol | 84.69 | 84.69 |
| CDY33644 | Canola | cytosol | 83.37 | 82.19 |
| KRH60909 | Soybean | endoplasmic reticulum | 54.29 | 50.09 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 50.71 | 49.4 |
| KRH51589 | Soybean | endoplasmic reticulum | 53.88 | 49.07 |
| PGSC0003DMT400025666 | Potato | cytosol | 7.24 | 43.83 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 40.2 | 41.61 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 40.41 | 41.6 |
| Os03t0130500-01 | Rice | plasma membrane | 43.67 | 40.07 |
| EER92924 | Sorghum | cytosol | 42.65 | 40.0 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 42.96 | 38.66 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 42.76 | 38.65 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 42.35 | 38.53 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 41.33 | 37.74 |
| Solyc04g082560.2.1 | Tomato | cytosol | 46.94 | 37.46 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 43.06 | 37.31 |
| Solyc02g082530.1.1 | Tomato | nucleus | 3.67 | 37.11 |
| Zm00001d048338_P035 | Maize | cytosol | 39.69 | 35.85 |
| Os06t0728600-00 | Rice | plasma membrane | 32.55 | 35.68 |
| CDY00394 | Canola | cytosol | 41.53 | 35.58 |
| CDY08192 | Canola | cytosol | 41.84 | 35.25 |
| CDY04654 | Canola | cytosol | 41.94 | 34.92 |
| CDY38814 | Canola | cytosol | 40.41 | 34.62 |
| Zm00001d027503_P036 | Maize | cytosol | 37.45 | 34.59 |
| CDY01320 | Canola | cytosol | 41.22 | 34.21 |
| CDX96582 | Canola | cytosol | 39.8 | 34.12 |
| Zm00001d037125_P009 | Maize | cytosol | 39.49 | 32.04 |
| Zm00001d014862_P002 | Maize | cytosol | 39.18 | 31.71 |
| EER89004 | Sorghum | cytosol | 39.39 | 31.48 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 38.98 | 29.41 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 38.67 | 29.33 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 38.67 | 29.29 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 37.24 | 28.16 |
| CDY29816 | Canola | cytosol | 10.31 | 19.2 |
| CDY25408 | Canola | cytosol | 10.2 | 19.05 |
| CDY50093 | Canola | cytosol | 10.0 | 18.46 |
| CDX94536 | Canola | cytosol | 10.1 | 18.1 |
| CDY16689 | Canola | cytosol | 10.0 | 17.95 |
| CDY50090 | Canola | cytosol | 10.0 | 17.19 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | GO:A0A078EJP6 | EnsemblPlants:CDY01356 | ProteinID:CDY01356 | ProteinID:CDY01356.1 |
| ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00112330001 | InterPro:IPR000261 | InterPro:IPR002048 |
| PFAM:PF12763 | ScanProsite:PS00018 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 |
| SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EED0AA | SEG:seg | : |
Description
BnaA07g11290D
Coordinates
chrLK031926:-:490112..494946
Molecular Weight (calculated)
105309.0 Da
IEP (calculated)
4.903
GRAVY (calculated)
-0.720
Length
980 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGPNPNMDQ FEAYFKRADL DGDGRISGVE AVAFFQGSGL PKQVLAQIWS LSDRSRSGFL GRQDFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
101: PKINLSAVPA PQPSPAATTP LPVASTGHQN VGFRGPAAPN QNYFPPQQNQ QVRPNQGVSG VTSLRPTAGP EYRPSPVPGQ FQPAPVGNVT RPSQAAATSA
201: SGPGSSAFNL NSLYAGNTVG YSSGFGGGSL AAPSPGLQPD SQVGPKALVV SGSGGDMFSS FQQKPEIALS NSSISSAIVP AGTQPAPKPN ALDSLQNTFS
301: MLPAGNQPQQ PRPAASSQPP AVSSQGPSSG LPHGSAVGSA HSTPAGNNQP PWPKMKPSDV QKYTKVFMSV DTDKDGKITG EQAKNLFLSW RLPREVLKHV
401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTSLPSS IMFDETLLSI SGAPSQGYAN AGWGSSQGFV QQPVMGARPI TPSTGMRPPV HTPVPHPGSG
501: VAPNQQRNQA PVMDDPFASH LGNGHSASSN LQETATDGEK VDEKKSVYMD SREKLEYYRT KMQDIVLYKS RCDNRLNEIS ERASSDKREA ETLAKKYEEK
601: YKQVAELGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVKSKALV DLPAGWQPGI QEGAALWDEE
701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVEDGSVPPP DSPTHLDENY GPFSETSDRH HESEYGTTHS DDESGRSPRD SPVSRTATEV PSPDYAGGKS
801: SEFFDDSNWA SAFDTNDDVD SVWGFDASKS QDGDYFGSGG GDFGGNSGRV DSPSSRSFGG QRKSPFAFDD SVPSTPLSRF GNSPPRFSDA STRDNNFDSF
901: SRFDSFNTTS EAGADFGGAA FSRFDSINSS RDFGGPSLSR FDSMNSTKDH GYSFDDADPF GSTGPFKVSS DDQSPKKRSF
101: PKINLSAVPA PQPSPAATTP LPVASTGHQN VGFRGPAAPN QNYFPPQQNQ QVRPNQGVSG VTSLRPTAGP EYRPSPVPGQ FQPAPVGNVT RPSQAAATSA
201: SGPGSSAFNL NSLYAGNTVG YSSGFGGGSL AAPSPGLQPD SQVGPKALVV SGSGGDMFSS FQQKPEIALS NSSISSAIVP AGTQPAPKPN ALDSLQNTFS
301: MLPAGNQPQQ PRPAASSQPP AVSSQGPSSG LPHGSAVGSA HSTPAGNNQP PWPKMKPSDV QKYTKVFMSV DTDKDGKITG EQAKNLFLSW RLPREVLKHV
401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTSLPSS IMFDETLLSI SGAPSQGYAN AGWGSSQGFV QQPVMGARPI TPSTGMRPPV HTPVPHPGSG
501: VAPNQQRNQA PVMDDPFASH LGNGHSASSN LQETATDGEK VDEKKSVYMD SREKLEYYRT KMQDIVLYKS RCDNRLNEIS ERASSDKREA ETLAKKYEEK
601: YKQVAELGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVKSKALV DLPAGWQPGI QEGAALWDEE
701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVEDGSVPPP DSPTHLDENY GPFSETSDRH HESEYGTTHS DDESGRSPRD SPVSRTATEV PSPDYAGGKS
801: SEFFDDSNWA SAFDTNDDVD SVWGFDASKS QDGDYFGSGG GDFGGNSGRV DSPSSRSFGG QRKSPFAFDD SVPSTPLSRF GNSPPRFSDA STRDNNFDSF
901: SRFDSFNTTS EAGADFGGAA FSRFDSINSS RDFGGPSLSR FDSMNSTKDH GYSFDDADPF GSTGPFKVSS DDQSPKKRSF
0001: MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL DRQNFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:Q9LM78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.