Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027503_P036 | Maize | cytosol | 83.16 | 81.9 |
| Zm00001d048338_P035 | Maize | cytosol | 83.64 | 80.55 |
| Os03t0130500-01 | Rice | plasma membrane | 81.72 | 79.96 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 81.05 | 77.78 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 80.38 | 77.49 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 79.71 | 77.34 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 80.48 | 74.36 |
| KRH74100 | Soybean | cytosol | 6.99 | 54.89 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 44.4 | 49.0 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 41.44 | 47.58 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 42.87 | 47.06 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 44.31 | 46.02 |
| KRH60909 | Soybean | endoplasmic reticulum | 44.59 | 43.88 |
| CDX96625 | Canola | cytosol | 40.86 | 43.57 |
| CDY31869 | Canola | cytosol | 40.77 | 42.99 |
| Bra012247.1-P | Field mustard | cytosol | 40.96 | 42.8 |
| CDY33644 | Canola | cytosol | 40.67 | 42.76 |
| CDY01356 | Canola | cytosol | 40.0 | 42.65 |
| AT1G20760.1 | Thale cress | cytosol | 41.44 | 42.49 |
| Bra025842.1-P | Field mustard | cytosol | 40.77 | 42.47 |
| KRH51589 | Soybean | endoplasmic reticulum | 43.73 | 42.47 |
| CDY29508 | Canola | cytosol | 39.9 | 41.99 |
| CDY66337 | Canola | cytosol | 39.71 | 41.92 |
| KRH14013 | Soybean | endoplasmic reticulum | 41.34 | 41.66 |
| KRH74101 | Soybean | endoplasmic reticulum | 32.63 | 39.74 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 40.29 | 37.09 |
| Solyc02g082540.2.1 | Tomato | nucleus | 36.27 | 36.44 |
| PGSC0003DMT400025666 | Potato | cytosol | 5.65 | 36.42 |
| Solyc04g082560.2.1 | Tomato | cytosol | 40.38 | 34.36 |
| CDY08192 | Canola | cytosol | 37.89 | 34.05 |
| CDY00394 | Canola | cytosol | 36.94 | 33.74 |
| Bra012288.1-P | Field mustard | cytosol | 36.46 | 33.63 |
| CDY38814 | Canola | cytosol | 36.55 | 33.39 |
| CDY04654 | Canola | cytosol | 37.51 | 33.3 |
| CDY01320 | Canola | cytosol | 37.22 | 32.94 |
| CDX96582 | Canola | cytosol | 35.79 | 32.72 |
| Bra016413.1-P | Field mustard | cytosol | 35.6 | 32.63 |
| EER89004 | Sorghum | cytosol | 38.09 | 32.46 |
| AT1G21630.2 | Thale cress | cytosol | 38.47 | 32.24 |
| Bra017933.1-P | Field mustard | cytosol | 36.55 | 30.98 |
| Solyc02g082530.1.1 | Tomato | nucleus | 2.2 | 23.71 |
| EER88852 | Sorghum | cytosol | 9.95 | 19.12 |
| OQU84412 | Sorghum | cytosol | 9.67 | 18.46 |
| EES11620 | Sorghum | cytosol | 9.28 | 17.9 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | EntrezGene:8085684 | UniProt:C5WZW8 | ncoils:Coil | EnsemblPlants:EER92924 |
| ProteinID:EER92924 | ProteinID:EER92924.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:EH_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR000261 | InterPro:IPR002048 | PFAM:PF12763 | PFAM:PF13202 |
| ScanProsite:PS00018 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 |
| SMART:SM00054 | EnsemblPlantsGene:SORBI_3001G518400 | SUPFAM:SSF47473 | UniParc:UPI0001A82CA0 | RefSeq:XP_002465926.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:78463104..78471535
Molecular Weight (calculated)
111050.0 Da
IEP (calculated)
5.271
GRAVY (calculated)
-0.603
Length
1045 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGTEAFEAY FRRADLNQDG RISGQEAVAF FQGANLPQQV LAQVWMHADQ NKTGFLGRPE FFNALRLVTV AQSGRQLTPD IVQSALYGPA AARIPAPKIA
0101: AGPAPAQMGA AGAPRPQGSA AMTPTPGQVG AAQMNPAATP RPQGSGMMPT SSQVSMPQVN PGAAPRPQGI SSMMPAASQG GALQASQFAG PRAMQPQPPN
0201: LGITQQQPSS TGFMRPPQVG APATSFQAQA PGINQGLVGG GSMGGSVGWQ GGNAASVGGI PQAIPGAAPL QTTRGGFGPG LPSTMGMAPG QQVQAMSSSP
0301: LPMQSNSAVL PQDSKALVLS GNGPASSSGS SADIFSALTQ PKPSVSAPAP QTSSIPSSSS FMPTPTGSQN LTNLAQFGSL QGSSQPQQTQ PVVKPSPAPA
0401: APVVSVGISN SASQWPKITQ SDIQKYMKVF GDVDRDRDGK ITGAEARTLF LSWRLPREVL KQVWDLSDQD NDGMLSLREF CIALYLMERH RAGTPLPPAL
0501: PDSLRHDETL LRATGLPSTA YNGPSWQHNQ GGLPQRGPGA AGVPGGVRPP LPPHLHSTDG ASRPGQPRSH MPGMDNHVVN QGNKDEKSGV NQAAQEVVDA
0601: PKKVEVEKQV LDSREKLEYY RTKMQDLVLY KSRCDNRLNE ITERASSDKR EVESLAKKYE EKYKQVAELA SKLAVEEAAY RDVQERKVEL HDALIKMVQG
0701: GSVDGLLQVR ADRIQYQLEE MEKALSERCK HFGLQFKSSA SVELPSGWEP GPQEGLIEWD EDWDKFEDEG FSIVKDNGTI QENPVSAENG KVPSLWDDGD
0801: DMSPVASSNG HIKEERRYSG GDQVAESEIA YDFGDESVRS PGSAGRSASG SPFKSSRFGM HDSSPSKRES YSDHGGSESV FGDKFADETS WNFDDQDTDS
0901: VWGSTALNTE ADQHGGTHSS FFGSEAGSPS GASVFGKKRS TFFDDSVPSS PAYTSGFSPK FGESRDDSSF GRFDSFRSQD TGFFPQESRF SRFDSISSSK
1001: GENVSGFDTG NSSQNFGRFD SFDDADPFGS SGPFKASGSR SPPKF
0101: AGPAPAQMGA AGAPRPQGSA AMTPTPGQVG AAQMNPAATP RPQGSGMMPT SSQVSMPQVN PGAAPRPQGI SSMMPAASQG GALQASQFAG PRAMQPQPPN
0201: LGITQQQPSS TGFMRPPQVG APATSFQAQA PGINQGLVGG GSMGGSVGWQ GGNAASVGGI PQAIPGAAPL QTTRGGFGPG LPSTMGMAPG QQVQAMSSSP
0301: LPMQSNSAVL PQDSKALVLS GNGPASSSGS SADIFSALTQ PKPSVSAPAP QTSSIPSSSS FMPTPTGSQN LTNLAQFGSL QGSSQPQQTQ PVVKPSPAPA
0401: APVVSVGISN SASQWPKITQ SDIQKYMKVF GDVDRDRDGK ITGAEARTLF LSWRLPREVL KQVWDLSDQD NDGMLSLREF CIALYLMERH RAGTPLPPAL
0501: PDSLRHDETL LRATGLPSTA YNGPSWQHNQ GGLPQRGPGA AGVPGGVRPP LPPHLHSTDG ASRPGQPRSH MPGMDNHVVN QGNKDEKSGV NQAAQEVVDA
0601: PKKVEVEKQV LDSREKLEYY RTKMQDLVLY KSRCDNRLNE ITERASSDKR EVESLAKKYE EKYKQVAELA SKLAVEEAAY RDVQERKVEL HDALIKMVQG
0701: GSVDGLLQVR ADRIQYQLEE MEKALSERCK HFGLQFKSSA SVELPSGWEP GPQEGLIEWD EDWDKFEDEG FSIVKDNGTI QENPVSAENG KVPSLWDDGD
0801: DMSPVASSNG HIKEERRYSG GDQVAESEIA YDFGDESVRS PGSAGRSASG SPFKSSRFGM HDSSPSKRES YSDHGGSESV FGDKFADETS WNFDDQDTDS
0901: VWGSTALNTE ADQHGGTHSS FFGSEAGSPS GASVFGKKRS TFFDDSVPSS PAYTSGFSPK FGESRDDSSF GRFDSFRSQD TGFFPQESRF SRFDSISSSK
1001: GENVSGFDTG NSSQNFGRFD SFDDADPFGS SGPFKASGSR SPPKF
0001: MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL DRQNFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:Q9LM78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.