Factsheet for Bra016413.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96582	Canola	cytosol	99.04	98.78
Bra012288.1-P	Field mustard	cytosol	83.77	84.29
AT1G21630.2	Thale cress	cytosol	84.21	76.98
Bra017933.1-P	Field mustard	cytosol	81.05	74.94
KRH74100	Soybean	cytosol	7.81	66.92
VIT_03s0038g03870.t01	Wine grape	cytosol	40.88	51.21
Solyc02g082540.2.1	Tomato	nucleus	40.61	44.52
GSMUA_Achr4P11750_001	Banana	cytosol	38.33	40.73
GSMUA_Achr8P13420_001	Banana	cytosol	33.86	40.55
Bra025842.1-P	Field mustard	cytosol	35.61	40.48
Bra012247.1-P	Field mustard	cytosol	34.47	39.3
GSMUA_Achr5P19150_001	Banana	endoplasmic reticulum	32.63	39.28
Os03t0130500-01	Rice	plasma membrane	34.39	36.7
Os06t0728600-00	Rice	plasma membrane	28.77	36.69
EER92924	Sorghum	cytosol	32.63	35.6
Zm00001d037125_P009	Maize	cytosol	37.63	35.51
Zm00001d014862_P002	Maize	cytosol	37.72	35.51
TraesCS5A01G497000.1	Wheat	cytosol	33.42	35.15
EER89004	Sorghum	cytosol	37.72	35.07
TraesCS4B01G324500.1	Wheat	cytosol	33.07	35.0
TraesCS4D01G321600.1	Wheat	cytosol	33.25	34.8
Bra016455.1-P	Field mustard	nucleus, plastid	34.04	34.19
TraesCS7D01G539600.2	Wheat	cytosol	38.51	33.98
TraesCS7A01G553100.1	Wheat	cytosol	38.42	33.85
HORVU4Hr1G082280.2	Barley	cytosol	33.33	33.6
TraesCS7B01G476800.3	Wheat	cytosol	38.16	33.49
HORVU7Hr1G121230.4	Barley	cytosol	36.93	32.48
Zm00001d027503_P036	Maize	cytosol	29.04	31.2
Zm00001d048338_P035	Maize	cytosol	29.21	30.69
Bra035794.1-P	Field mustard	cytosol	9.39	20.38
Bra029477.1-P	Field mustard	cytosol	8.86	18.5
Bra038259.1-P	Field mustard	cytosol	9.21	18.42

Protein Annotations

Gene3D:1.10.238.10	MapMan:22.1.4.7	EnsemblPlantsGene:Bra016413	EnsemblPlants:Bra016413.1	EnsemblPlants:Bra016413.1-P	ncoils:Coil
InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EH_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	InterPro:IPR000261	InterPro:IPR002048	UniProt:M4DIT6	PFAM:PF12763	PFscan:PS50031
PFscan:PS50222	PANTHER:PTHR11216	PANTHER:PTHR11216:SF116	SMART:SM00027	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI00025467B4	SEG:seg	:	:	:	:

Description

AT1G21630 (E=0.0) | calcium-binding EF hand family protein

Coordinates

chrA08:-:18337225..18342831

Molecular Weight (calculated)

124309.0 Da

IEP (calculated)

5.921

GRAVY (calculated)

-0.830

Length

1140 amino acids

Sequence
(BLAST)

0001: MAAARPAGSQ DLFGAYFRRA DLDGDGRISG AEAVAFFQGS NLPKNVLAQV WSYADAKKAG YLGRAEFYNA LKLVTVAQSR RELTPEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVVP ATQAQGGASL PSVPAGMRVP QMGGTVSTSN QQGQQNQFNG PPPSQPQKNF QSQGMPAGGT SAHRPATQPM PSDRLSGRSV
0201: GPSGHVNSQI PSNQSGYGLT APNSIANNIP KPHMTPAVIS STTARPQESA PVHKPQDSSA PSDAPSNQLV AKDPKELAAS GNGFPSDSLF GDVFTVASSQ
0301: PQQHSTGTMS TMGISSSSGT TGSTVGVGLA ASSQMTQRQS QHQPQNQPQH QPQHQPQHHP RPHPQPQLQP QHQPHPHPQA PWPRMNPADV QKYTKVFVQV
0401: DTDRDRKITG NQARNLFLSW KLPREALKQV WDLSDQDNDS MLSLREFCIA VYLMERYREG RPLPPVFPNT IISSESMFTS PSQSVAPQGN ASWGHTHGQF
0501: QGASRPPAIP KGKPPRPVPL SPSDGMVQST QPKRKMPELE KHLVDDLEKE IADSKQKIEF FHAKMQELVL YKSRCDNRYN EITERVSGDK RELESLAKKY
0601: EEKYKKSGNV GSKLTIEEAT FRDIQEKKME LYQAIVKFEE GKLDDNIVKE RTEHIQSGLE ELIKNLNERC KQYGVRGKPT SLVELPFGWQ FGIQECAADW
0701: DEDWDKLEEE GFTFVKELTL DVQNVIAPPK EKSSTWKKEA TVSSNEGENL SSSDVESKKE KNPSSGEEAS GHVDGKTDRN GSLDDSIVRK GVEADGSPGT
0801: KDTRSENGHD DGESTASAGK TANEPSYDSH DETDSVSSFN PDNGKDKKHD SDFGFGFGFD DFSIKPIKTG STLSNDFLPP KLFIFSDSVP SPPANANDGF
0901: TPKPSLFADS VPSTPATTTA SYSGNKSYFD ESVPSTPAYA GKSYFDDSVP STPAYPGNLF PEKKSFFDDS VPSTPAYSTS DFGGKPFASE TPRSDNLFPG
1001: RSPFMFDSVP STPAAHDDFS SNSFSRFDSF NSNNNNDAFS LSRSDSMRST SEPDPFASRF DSFNYQRYDS FNAQSYDNNN ASETPKASLT RFDSIGSTRD
1101: SDYSHGFGFD DHDPFGSTGP FKTTTSTAET PRSSDHWNAF

Best Arabidopsis Sequence Match ( AT1G21630.1 )
(BLAST)

0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF

Arabidopsis Description

Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.