Factsheet for HORVU4Hr1G082280.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G042290.1
HORVU2Hr1G002410.2
HORVU2Hr1G002480.5
HORVU2Hr1G018720.2
HORVU2Hr1G073760.2
HORVU2Hr1G112780.2
HORVU2Hr1G113460.2
HORVU3Hr1G030140.1
HORVU3Hr1G032710.2
HORVU3Hr1G058910.1
HORVU3Hr1G098440.1
HORVU4Hr1G011850.1
HORVU4Hr1G019290.1
HORVU5Hr1G033310.1
HORVU5Hr1G067090.1
HORVU6Hr1G069160.1
HORVU7Hr1G058240.1
HORVU7Hr1G068500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20760.1	HORVU2Hr1G112780.2	AT1G15370.1	24529374
AT1G20760.1	HORVU3Hr1G030140.1	AT1G15370.1	24529374
AT1G20760.1	HORVU3Hr1G032710.2	AT1G15370.1	24529374
AT1G20760.1	HORVU3Hr1G098440.1	AT1G15370.1	24529374
AT1G20760.1	HORVU6Hr1G069160.1	AT1G15370.1	24529374
AT1G20760.1	HORVU7Hr1G058240.1	AT1G15370.1	24529374
AT1G20760.1	HORVU7Hr1G068500.1	AT1G15370.1	24529374
AT1G20760.1	HORVU5Hr1G033310.1	AT1G47830.1	24529374
AT1G20760.1	HORVU4Hr1G019290.1	AT3G01780.1	24529374
AT1G20760.1	HORVU2Hr1G018720.2	AT3G06810.1	24529374
AT1G20760.1	HORVU2Hr1G073760.2	AT3G11630.1	24529374
AT1G20760.1	HORVU5Hr1G067090.1	AT3G50590.1	24529374
AT1G20760.1	HORVU1Hr1G042290.1	AT5G24710.1	24529374
AT1G20760.1	HORVU3Hr1G058910.1	AT5G24710.1	24529374
AT1G20760.1	HORVU2Hr1G113460.2	AT5G43060.1	24529374
AT1G20760.1	HORVU4Hr1G011850.1	AT5G55070.1	24529374
AT1G20760.1	HORVU2Hr1G002410.2	AT5G57460.1	24529374
AT1G20760.1	HORVU2Hr1G002480.5	AT5G57460.1	24529374

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G321600.1	Wheat	cytosol	91.25	94.77
TraesCS5A01G497000.1	Wheat	cytosol	90.36	94.28
TraesCS4B01G324500.1	Wheat	cytosol	89.66	94.15
EER92924	Sorghum	cytosol	74.36	80.48
Os03t0130500-01	Rice	plasma membrane	75.51	79.96
Zm00001d027503_P036	Maize	cytosol	64.37	68.61
Zm00001d048338_P035	Maize	cytosol	65.61	68.39
KRH74100	Soybean	cytosol	6.45	54.89
GSMUA_Achr5P19150_001	Banana	endoplasmic reticulum	40.05	47.84
VIT_03s0038g03870.t01	Wine grape	cytosol	38.2	47.47
GSMUA_Achr8P13420_001	Banana	cytosol	39.79	47.27
VIT_18s0122g01080.t01	Wine grape	cytosol	40.41	45.43
KRH60909	Soybean	endoplasmic reticulum	41.03	43.69
CDY31869	Canola	cytosol	37.93	43.29
Bra012247.1-P	Field mustard	cytosol	38.11	43.1
CDY01356	Canola	cytosol	37.31	43.06
CDX96625	Canola	cytosol	37.14	42.86
Bra025842.1-P	Field mustard	cytosol	37.93	42.77
KRH51589	Soybean	endoplasmic reticulum	40.58	42.66
CDY33644	Canola	cytosol	37.49	42.66
AT1G20760.1	Thale cress	cytosol	38.37	42.59
CDY66337	Canola	cytosol	37.14	42.42
CDY29508	Canola	cytosol	37.22	42.4
KRH14013	Soybean	endoplasmic reticulum	37.93	41.37
KRH74101	Soybean	endoplasmic reticulum	29.89	39.39
PGSC0003DMT400025666	Potato	cytosol	5.39	37.65
Bra016455.1-P	Field mustard	nucleus, plastid	37.31	37.18
Solyc02g082540.2.1	Tomato	nucleus	33.16	36.06
Solyc04g082560.2.1	Tomato	cytosol	37.84	34.85
CDY00394	Canola	cytosol	34.57	34.18
CDY08192	Canola	cytosol	35.1	34.14
Bra012288.1-P	Field mustard	cytosol	33.95	33.89
CDY38814	Canola	cytosol	34.22	33.83
CDY04654	Canola	cytosol	35.01	33.64
Bra016413.1-P	Field mustard	cytosol	33.6	33.33
CDX96582	Canola	cytosol	33.69	33.33
CDY01320	Canola	cytosol	34.57	33.11
AT1G21630.2	Thale cress	cytosol	35.81	32.48
Bra017933.1-P	Field mustard	cytosol	34.13	31.31
HORVU7Hr1G121230.4	Barley	cytosol	34.48	30.09
Solyc02g082530.1.1	Tomato	nucleus	2.12	24.74
HORVU0Hr1G015420.3	Barley	cytosol, plastid	10.17	19.1
HORVU2Hr1G122390.1	Barley	cytosol	8.66	17.88
HORVU7Hr1G100500.8	Barley	cytosol, plastid	9.55	17.01
HORVU7Hr1G060580.1	Barley	cytosol, plastid	6.37	16.55

Protein Annotations

Gene3D:1.10.238.10	MapMan:22.1.4.7	UniProt:A0A287PVG3	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	InterPro:EH_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
EnsemblPlantsGene:HORVU4Hr1G082280	EnsemblPlants:HORVU4Hr1G082280.2	InterPro:IPR000261	InterPro:IPR002048	PFAM:PF12763	PFAM:PF13202
ScanProsite:PS00018	PFscan:PS50031	PFscan:PS50222	PANTHER:PTHR11216	PANTHER:PTHR11216:SF116	SMART:SM00027
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000B480DA1	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:-:621947615..621955011

Molecular Weight (calculated)

115642.0 Da

IEP (calculated)

5.733

GRAVY (calculated)

-0.613

Length

1131 amino acids

Sequence
(BLAST)

0001: PPARDTLPRD LPTARGSRSA RPARSPPRIP AMAGMEAFEA YFRRADLNQD GRISGQEAVA FFQGASLPQQ VLAQVWMHAD QSKTGFLGRP EFFNALRLVT
0101: VAQSGRQLTP DIVQSALYGP AAARIPPPKI AGQAGVAAPR PQGNAAAPAP APGQAGATQM NPAAAGAPRP QGSGMMPTXX XXXXXXXXXX XXXXXXXXXX
0201: XXXXXXXXXX XXXXXXXXXM MPTSTQFAGA PQANAGAVPR PQGISSMMPA ASQGGAMPPN QFSGPRGTQS QSPNMGYAQQ LLTSSTGFMR PPPQVGAPAT
0301: SLQPTGMNQS PLGGGSMGGS VGWQGGNVGS FGGISQPSPG AAVPSQPTSG GFGLGMSSSM GMVPGQQTHA LSSSSLPPQS NSAVLPADSR ALVLSGNGPA
0401: SGSGADTDIF SALTQPKPST STPALLTGTM PNSSSFMSKP TGSQNLANLT QPGSLQSTPT VSYGTSQPQQ TQPITKPSVP APGVSAGVSN STSQWPKVNQ
0501: SDIQKYTKVF GDVDRDRDGK ITGAEARTLF LSWRLPRDVL KQVWDLSDQD NDGMLSLREF CIALYLMERN RAGTPLPPSL PDSLKFDETL LRATGLPSTA
0601: YNAPSWQPNQ GLPHRGPGAP GLPTGGVRPP LPQMHSQTDG ATRPGQPRPH MPGMDNHAAA QGIKDDRSGV NSAAQEAPKK VEVEKQVLDS REKLEYYRTK
0701: MQDLVLYKSR CDNRLNEITE RASSDKREVE LLSKKYEEKY KQVAELASKL AVEEAAFRDV QERKVELNDA LIKMVQGGSV DGLLQVRADR IQHQLEEMEK
0801: AFNERCKHFG LQFKPSATVE LPFGWEPGQQ EGAVEWDEDW DKFEDEGFGL VKDNGTIVEN PASSENANTS SLWDDGVSTD GMSPVASSNG HIKDVRHYRA
0901: GDQAPESELA YDFGDESVRS PGSAGRSASG SPFKSSRFGV HDSSPTKKGT YSDHGGSESV FGDNYGDETT WNFDDQDTES VWGSNAMNEP GHHGSNSFFG
1001: SDDFNVDPVR VGSPSGASVY GKKSTFFDDS VPSSPAYTSG FSPKFGESRD DSSSYNFGRF DSFRSQDSAV PQESRFSRFD SVTSSKGESA AGFDSSNSSR
1101: NFGRFDSFDE ADPFGSTGPF KASGARSPPK F

Best Arabidopsis Sequence Match ( AT1G20760.1 )
(BLAST)

0001: MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL DRQNFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF

Arabidopsis Description

Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:Q9LM78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.