Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08192 | Canola | cytosol | 94.56 | 95.7 |
| CDY00394 | Canola | cytosol | 82.16 | 84.53 |
| CDY38814 | Canola | cytosol | 81.9 | 84.27 |
| CDX96582 | Canola | cytosol | 80.71 | 83.11 |
| CDY01320 | Canola | cytosol | 83.35 | 83.07 |
| Bra017933.1-P | Field mustard | cytosol | 85.47 | 81.59 |
| AT1G21630.2 | Thale cress | cytosol | 84.79 | 80.03 |
| KRH74100 | Soybean | cytosol | 7.31 | 64.66 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 40.7 | 52.64 |
| Solyc02g082540.2.1 | Tomato | nucleus | 41.89 | 47.4 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 34.83 | 43.07 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 39.0 | 42.78 |
| CDY29508 | Canola | cytosol | 35.94 | 42.6 |
| CDY31869 | Canola | cytosol | 35.77 | 42.48 |
| CDY66337 | Canola | cytosol | 35.6 | 42.32 |
| CDY01356 | Canola | cytosol | 34.92 | 41.94 |
| CDX96625 | Canola | cytosol | 34.92 | 41.94 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 33.3 | 41.39 |
| CDY33644 | Canola | cytosol | 34.75 | 41.15 |
| Os06t0728600-00 | Rice | plasma membrane | 29.91 | 39.37 |
| Os03t0130500-01 | Rice | plasma membrane | 34.66 | 38.2 |
| Zm00001d014862_P002 | Maize | cytosol | 39.0 | 37.9 |
| Zm00001d037125_P009 | Maize | cytosol | 38.57 | 37.58 |
| EER92924 | Sorghum | cytosol | 33.3 | 37.51 |
| EER89004 | Sorghum | cytosol | 38.74 | 37.19 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 33.56 | 36.68 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 33.81 | 36.55 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 33.64 | 36.53 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 40.1 | 36.48 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 39.93 | 36.38 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 39.59 | 35.87 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 33.64 | 35.01 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 38.4 | 34.88 |
| Zm00001d027503_P036 | Maize | cytosol | 29.91 | 33.18 |
| Zm00001d048338_P035 | Maize | cytosol | 29.91 | 32.44 |
| CDY25408 | Canola | cytosol | 9.52 | 21.33 |
| CDY29816 | Canola | cytosol | 9.52 | 21.29 |
| CDY50093 | Canola | cytosol | 9.26 | 20.53 |
| CDX94536 | Canola | cytosol | 9.09 | 19.56 |
| CDY16689 | Canola | cytosol | 9.01 | 19.41 |
| CDY50090 | Canola | cytosol | 9.26 | 19.12 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | GO:A0A078EVM9 | EnsemblPlants:CDY04654 | ProteinID:CDY04654 | ProteinID:CDY04654.1 |
| ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00119252001 | InterPro:IPR000261 | InterPro:IPR002048 | PFAM:PF12763 |
| PFAM:PF13202 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EE6F1C | SEG:seg | : | : |
Description
BnaC05g16920D
Coordinates
chrLK031956:+:632597..638543
Molecular Weight (calculated)
127776.0 Da
IEP (calculated)
5.108
GRAVY (calculated)
-0.667
Length
1177 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPRPTGSQ DLFDTYFRRA DLDGDGRISG AEAVGFFQGS NLPKPVLAQV WSYADAKKAG YLGRAEFYNA LKLVTVAQSR RELTPEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGPVT QTPGVTSVAA GVRGPQMGGN ISTSNQQVVS GQQNQFTGPP PSQPPQNFQS HGMPAGGTSA PRTANQPMPS DWLSGRSVGP
0201: SGQVNSQIPS SQSGSGLTAP NSIANNIPKP HMTPAVISST TTRPQVPVPA SSPLDAPSNQ LVAKDPKELA ASGNGFPSDS IFGDVFSVAS TQPKQHTTGT
0301: TSTMGISSVS TGTVVAPEVA QSVARQSSIP QRGSLSQHPV GVQNQLTGNL GQSFVPAGAA SGTTGSTVGP QSPWPKMTPA DVQKYTKVFV QVDTDRDGKI
0401: TGHQARILFL SWKLPREALK QVWDLSDQDN DSMLSLREFC IAVYLMERYR EGRPLPPVFP STIISSESMF ASPGQSVAPH GNASWGHPHG QVHGGSRPPA
0501: IPKGKPPRPV PLSPSDGLVQ PTQPKRKMPE LEKPLVDQLS KEEQDALNSK FEEATAVDKK ALSDFSLILI HIPDSKFPIL ILLLNLFEAN YYNLCAFLAY
0601: VDDLEKEIAD SKQKIEFFHA KMQELVLYKS RCDNRYNEIT ERVSGDKREL ESLAKKYEEK YKKSGNVGSK LTIEEATFRD IQEKKMELYQ AIVKFEEGKL
0701: DDNIVKERTE HIQSGLEELI KNLNERCKQY GVRGKPTSLV ELPFGWQPGI QEVAADWDED WDKLEEEGFT FVKELTLDVQ NVIAPPKEKS SAWKKELNVS
0801: SNESADVSSS DVESKTEKKP SSGEEASEHS DGKTDRNGSL DDSNIRESIE ADGSPRTKDT RSENGHDDGE STASAGKTVN YDSHDETDSV SSFNPDNGKD
0901: KDHEKRDNDF GFGFGFDDFS IKPIKTGSTL SSDFLPPKLS IFSDSVPSPP ANANDGFTVK PSLFDGSVPS TPATTTASYS GNKSYFDESV PSTPAYPGNL
1001: FSEKKSFFDS VPSTPAYPGS SVFPEKKSFF DDSVPSTPAY STSDFGGKPT PAAHDDFSSN RFSRFDSFNS NTNDAFSLSR SDSMRSTSEP DPFASRFDSF
1101: NYQRYDSFNA QNYDNNNASE TPKASLSRFD SIGSTRDSDY SHGFGFDDHD PFGSTGPFKI TTTTAETPRS NDHWNAF
0101: PAPKINLAAT PSPQPRGPVT QTPGVTSVAA GVRGPQMGGN ISTSNQQVVS GQQNQFTGPP PSQPPQNFQS HGMPAGGTSA PRTANQPMPS DWLSGRSVGP
0201: SGQVNSQIPS SQSGSGLTAP NSIANNIPKP HMTPAVISST TTRPQVPVPA SSPLDAPSNQ LVAKDPKELA ASGNGFPSDS IFGDVFSVAS TQPKQHTTGT
0301: TSTMGISSVS TGTVVAPEVA QSVARQSSIP QRGSLSQHPV GVQNQLTGNL GQSFVPAGAA SGTTGSTVGP QSPWPKMTPA DVQKYTKVFV QVDTDRDGKI
0401: TGHQARILFL SWKLPREALK QVWDLSDQDN DSMLSLREFC IAVYLMERYR EGRPLPPVFP STIISSESMF ASPGQSVAPH GNASWGHPHG QVHGGSRPPA
0501: IPKGKPPRPV PLSPSDGLVQ PTQPKRKMPE LEKPLVDQLS KEEQDALNSK FEEATAVDKK ALSDFSLILI HIPDSKFPIL ILLLNLFEAN YYNLCAFLAY
0601: VDDLEKEIAD SKQKIEFFHA KMQELVLYKS RCDNRYNEIT ERVSGDKREL ESLAKKYEEK YKKSGNVGSK LTIEEATFRD IQEKKMELYQ AIVKFEEGKL
0701: DDNIVKERTE HIQSGLEELI KNLNERCKQY GVRGKPTSLV ELPFGWQPGI QEVAADWDED WDKLEEEGFT FVKELTLDVQ NVIAPPKEKS SAWKKELNVS
0801: SNESADVSSS DVESKTEKKP SSGEEASEHS DGKTDRNGSL DDSNIRESIE ADGSPRTKDT RSENGHDDGE STASAGKTVN YDSHDETDSV SSFNPDNGKD
0901: KDHEKRDNDF GFGFGFDDFS IKPIKTGSTL SSDFLPPKLS IFSDSVPSPP ANANDGFTVK PSLFDGSVPS TPATTTASYS GNKSYFDESV PSTPAYPGNL
1001: FSEKKSFFDS VPSTPAYPGS SVFPEKKSFF DDSVPSTPAY STSDFGGKPT PAAHDDFSSN RFSRFDSFNS NTNDAFSLSR SDSMRSTSEP DPFASRFDSF
1101: NYQRYDSFNA QNYDNNNASE TPKASLSRFD SIGSTRDSDY SHGFGFDDHD PFGSTGPFKI TTTTAETPRS NDHWNAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKFSF FAFSIRRYLL PLPYGIYMKY LWICVAIVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK
0701: SGNVGSKLTI EEATFRDIQE KKMELYQAIV KFEEGKLDDS IVKRTEHIQS GLEELIKNLN ERCKQYGVRG KPTSLVELPF GWQPGIQEGA ADWDEDWDKL
0801: EDEGFTFVKE LTLDIQNVIA PPKEKSSAWR KEVDVSSKEG EDVSFSDADS KTGKKQSSGE EDSEQSEGKT SDVDARDKNG SLDDSKVRKG IEADSSPRTK
0901: DTRSENGHDD GESTASAGKT VNYDSHDETD SVSSVNPDNG KDKDHGKYDS GFGFGFGFDD FSIKPIKTGS TISNDFLPPK LSIFADSVPS PPANASDVSP
1001: TKPSLFADSV PSTPATNNAS YPGQKSFFDD SVPSTPAYPG NLFAEKKSFF DDSVPSTPAY PGNLFAEKKS YFDDSVPSTP AYSTSDFGGK PFASETPRSD
1101: NLFPGRSPFM FDSVPSTPAA HDDFSNNSFS RFDSFNSNNN DAFSLSRTDS MRSTSEPDPF ASRFDSFNYQ RYDSFNAQSY DSSSNNNASE TPKASLTRFD
1201: SIGSTRDSDY SHGFGFDDHD PFGSTGPFKT TTTTAETPRS SDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKFSF FAFSIRRYLL PLPYGIYMKY LWICVAIVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK
0701: SGNVGSKLTI EEATFRDIQE KKMELYQAIV KFEEGKLDDS IVKRTEHIQS GLEELIKNLN ERCKQYGVRG KPTSLVELPF GWQPGIQEGA ADWDEDWDKL
0801: EDEGFTFVKE LTLDIQNVIA PPKEKSSAWR KEVDVSSKEG EDVSFSDADS KTGKKQSSGE EDSEQSEGKT SDVDARDKNG SLDDSKVRKG IEADSSPRTK
0901: DTRSENGHDD GESTASAGKT VNYDSHDETD SVSSVNPDNG KDKDHGKYDS GFGFGFGFDD FSIKPIKTGS TISNDFLPPK LSIFADSVPS PPANASDVSP
1001: TKPSLFADSV PSTPATNNAS YPGQKSFFDD SVPSTPAYPG NLFAEKKSFF DDSVPSTPAY PGNLFAEKKS YFDDSVPSTP AYSTSDFGGK PFASETPRSD
1101: NLFPGRSPFM FDSVPSTPAA HDDFSNNSFS RFDSFNSNNN DAFSLSRTDS MRSTSEPDPF ASRFDSFNYQ RYDSFNAQSY DSSSNNNASE TPKASLTRFD
1201: SIGSTRDSDY SHGFGFDDHD PFGSTGPFKT TTTTAETPRS SDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.