Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08192 | Canola | cytosol | 82.4 | 87.36 |
| CDY04654 | Canola | cytosol | 81.59 | 85.47 |
| Bra016413.1-P | Field mustard | cytosol | 74.94 | 81.05 |
| Bra012288.1-P | Field mustard | cytosol | 72.83 | 79.26 |
| AT1G21630.2 | Thale cress | cytosol | 76.24 | 75.38 |
| KRH74100 | Soybean | cytosol | 6.81 | 63.16 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 37.06 | 50.22 |
| Solyc02g082540.2.1 | Tomato | nucleus | 39.9 | 47.31 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 36.33 | 41.75 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 31.63 | 40.97 |
| Bra025842.1-P | Field mustard | cytosol | 32.12 | 39.48 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 30.17 | 39.28 |
| Os06t0728600-00 | Rice | plasma membrane | 28.47 | 39.26 |
| Bra012247.1-P | Field mustard | cytosol | 31.22 | 38.5 |
| Os03t0130500-01 | Rice | plasma membrane | 32.04 | 36.98 |
| EER92924 | Sorghum | cytosol | 30.98 | 36.55 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 31.22 | 35.75 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 31.47 | 35.63 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 31.31 | 35.61 |
| Zm00001d014862_P002 | Maize | cytosol | 34.87 | 35.51 |
| Zm00001d037125_P009 | Maize | cytosol | 34.47 | 35.18 |
| EER89004 | Sorghum | cytosol | 34.79 | 34.99 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 31.31 | 34.13 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 35.6 | 33.98 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 35.44 | 33.77 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 35.2 | 33.41 |
| Zm00001d048338_P035 | Maize | cytosol | 29.12 | 33.09 |
| Zm00001d027503_P036 | Maize | cytosol | 28.47 | 33.08 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 30.41 | 33.04 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 34.06 | 32.41 |
| Bra035794.1-P | Field mustard | cytosol | 8.52 | 20.0 |
| Bra029477.1-P | Field mustard | cytosol | 8.35 | 18.86 |
| Bra038259.1-P | Field mustard | cytosol | 8.35 | 18.07 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | EnsemblPlantsGene:Bra017933 | EnsemblPlants:Bra017933.1 | EnsemblPlants:Bra017933.1-P | ncoils:Coil |
| InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005515 | InterPro:IPR000261 | InterPro:IPR002048 | UniProt:M4DN46 | PFAM:PF12763 | PFAM:PF13202 |
| PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI000253F134 | SEG:seg | : | : | : |
Description
AT1G21630 (E=5e-305) | calcium-binding EF hand family protein
Coordinates
chrA06:+:8929985..8935889
Molecular Weight (calculated)
133963.0 Da
IEP (calculated)
6.768
GRAVY (calculated)
-0.737
Length
1233 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAALRPTGGQ DLFDTYFRRA DLDGDGRISG AEAVGFFQGS NFPKTVLAQV WSYADAKKAG YLGRAEFYNA LKLVTVAQSR RELTPQIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGPVA QTPGVASVAA AMRGPQMGGN MSTSNQQVVP GQQNQFTGPP PSQPPQNFQS QGMPAGGTSA PRTANQPMPS DWLSGRSVGP
0201: SGQVNSQIPS SQSGYGLTAP NSMANNIPQP HMTPAVISSK TTRPQVPVPA SAPLDAPSNQ LVAKDLAASG NGFPSDSIFG DVFSVASTQP KQHTTGTTLT
0301: MGISSVSTGT VVAPEVAQSV ARQSSIPQRG SLSQHPVGVQ NQLTGNLGQS FVPAGAASGT TGSTVGVGIS ASSQLTQRQS QPSQPQPRHQ PHPQPQPQHH
0401: PRPQPQPQPQ PQPQPRTQHQ PHYQPQAPWP KMTPADVQKY TKVFVQVDTD RDGKITGHQA RNLFLSWKLP REALKQVWDL SDQDNDSMLS LREFCIAVYL
0501: MERYREGRPL PPVFPSTIIS SESMFTSPGQ SVAPHNNASW GHPHGQVHGG SRPPAIPKGK PPRPVSLSPS DGLVQPTQPK RKMPELEKHL VDQLSKEEQD
0601: ALNSKFEEAT AVDELEKEIA DSKQKIEFFH AKMQELVLYK SRCDNRYNEI TERVSGDKRE LESLAKKYEE KYKKSGNVGS KLTIEEATFR DIQEKKMELY
0701: QAIVKFEEGK LDDNIVKERT EHIQSGLEEL IKNLNERCKQ YGVRGKPTSL VELPFGWQPG IQEGAADWDE DWDKLEEEGF TFVKELTLDV QNVIAPPKEK
0801: SSAWKKELTV SSNESADVSS SDVVSKTEKK PSSGEEASEH SDGKTDRNGS LDDSNVRESI EADGSPRTKD SKSENGHDDG ESTASAGKTV NYDSHDETDS
0901: VSSSNPDNGK DKDHEKRDND FGFGFGFDDF SIKPIKTGST LSNDFLPPKL YRFSDSVPSP PANANDGFTA KPSLFDGSVP STPATTTASY SGNKSYFDES
1001: VPSTPAYPGN LFSEKKSFFD DMVPSTPAYP GSSFPEKKSF FDDSVPSTPA YPGSVFPEKK SFFDDSVPST PAYSTSDFGG KPFASETPRS DSLFPGRSPF
1101: MFDSVPSTPA AHDDFSSNSF SRFDSFNSNN NNDAAQARQT HSHPGLILSI IKDMIPSMHK ATTTTTHPRH LKPHCRDSTR LEAPETLITI TGLGSMTMTR
1201: SVLRGRSKQL QQQLRHLGAM IIGMPSSPHK PHV
0101: PAPKINLAAT PSPQPRGPVA QTPGVASVAA AMRGPQMGGN MSTSNQQVVP GQQNQFTGPP PSQPPQNFQS QGMPAGGTSA PRTANQPMPS DWLSGRSVGP
0201: SGQVNSQIPS SQSGYGLTAP NSMANNIPQP HMTPAVISSK TTRPQVPVPA SAPLDAPSNQ LVAKDLAASG NGFPSDSIFG DVFSVASTQP KQHTTGTTLT
0301: MGISSVSTGT VVAPEVAQSV ARQSSIPQRG SLSQHPVGVQ NQLTGNLGQS FVPAGAASGT TGSTVGVGIS ASSQLTQRQS QPSQPQPRHQ PHPQPQPQHH
0401: PRPQPQPQPQ PQPQPRTQHQ PHYQPQAPWP KMTPADVQKY TKVFVQVDTD RDGKITGHQA RNLFLSWKLP REALKQVWDL SDQDNDSMLS LREFCIAVYL
0501: MERYREGRPL PPVFPSTIIS SESMFTSPGQ SVAPHNNASW GHPHGQVHGG SRPPAIPKGK PPRPVSLSPS DGLVQPTQPK RKMPELEKHL VDQLSKEEQD
0601: ALNSKFEEAT AVDELEKEIA DSKQKIEFFH AKMQELVLYK SRCDNRYNEI TERVSGDKRE LESLAKKYEE KYKKSGNVGS KLTIEEATFR DIQEKKMELY
0701: QAIVKFEEGK LDDNIVKERT EHIQSGLEEL IKNLNERCKQ YGVRGKPTSL VELPFGWQPG IQEGAADWDE DWDKLEEEGF TFVKELTLDV QNVIAPPKEK
0801: SSAWKKELTV SSNESADVSS SDVVSKTEKK PSSGEEASEH SDGKTDRNGS LDDSNVRESI EADGSPRTKD SKSENGHDDG ESTASAGKTV NYDSHDETDS
0901: VSSSNPDNGK DKDHEKRDND FGFGFGFDDF SIKPIKTGST LSNDFLPPKL YRFSDSVPSP PANANDGFTA KPSLFDGSVP STPATTTASY SGNKSYFDES
1001: VPSTPAYPGN LFSEKKSFFD DMVPSTPAYP GSSFPEKKSF FDDSVPSTPA YPGSVFPEKK SFFDDSVPST PAYSTSDFGG KPFASETPRS DSLFPGRSPF
1101: MFDSVPSTPA AHDDFSSNSF SRFDSFNSNN NNDAAQARQT HSHPGLILSI IKDMIPSMHK ATTTTTHPRH LKPHCRDSTR LEAPETLITI TGLGSMTMTR
1201: SVLRGRSKQL QQQLRHLGAM IIGMPSSPHK PHV
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.