Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G539600.2 | Wheat | cytosol | 94.98 | 95.28 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 94.6 | 94.38 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 94.14 | 94.28 |
| Zm00001d037125_P009 | Maize | cytosol | 70.76 | 75.91 |
| Os06t0728600-00 | Rice | plasma membrane | 51.54 | 74.72 |
| EER89004 | Sorghum | cytosol | 70.06 | 74.06 |
| Zm00001d014862_P002 | Maize | cytosol | 69.06 | 73.91 |
| KRH74100 | Soybean | cytosol | 4.71 | 45.86 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 32.18 | 45.82 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 35.03 | 42.31 |
| KRH14013 | Soybean | endoplasmic reticulum | 33.02 | 41.27 |
| Solyc02g082530.1.1 | Tomato | nucleus | 3.09 | 41.24 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 31.71 | 40.85 |
| Solyc02g082540.2.1 | Tomato | nucleus | 32.72 | 40.77 |
| KRH74101 | Soybean | endoplasmic reticulum | 26.93 | 40.68 |
| KRH60909 | Soybean | endoplasmic reticulum | 32.33 | 39.45 |
| KRH51589 | Soybean | endoplasmic reticulum | 32.41 | 39.03 |
| PGSC0003DMT400025666 | Potato | cytosol | 4.86 | 38.89 |
| CDX96625 | Canola | cytosol | 29.32 | 38.78 |
| CDY38814 | Canola | cytosol | 34.1 | 38.64 |
| CDY08192 | Canola | cytosol | 34.49 | 38.44 |
| CDY04654 | Canola | cytosol | 34.88 | 38.4 |
| Bra025842.1-P | Field mustard | cytosol | 29.55 | 38.19 |
| CDY00394 | Canola | cytosol | 33.64 | 38.11 |
| CDY29508 | Canola | cytosol | 28.94 | 37.76 |
| CDY66337 | Canola | cytosol | 28.7 | 37.58 |
| CDY33644 | Canola | cytosol | 28.78 | 37.53 |
| CDY31869 | Canola | cytosol | 28.63 | 37.44 |
| Bra012288.1-P | Field mustard | cytosol | 32.64 | 37.33 |
| CDY01320 | Canola | cytosol | 33.95 | 37.26 |
| CDY01356 | Canola | cytosol | 28.16 | 37.24 |
| AT1G20760.1 | Thale cress | cytosol | 29.24 | 37.19 |
| Bra012247.1-P | Field mustard | cytosol | 28.63 | 37.1 |
| CDX96582 | Canola | cytosol | 32.64 | 37.01 |
| Bra016413.1-P | Field mustard | cytosol | 32.48 | 36.93 |
| AT1G21630.2 | Thale cress | cytosol | 34.95 | 36.33 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 30.09 | 34.48 |
| Bra017933.1-P | Field mustard | cytosol | 32.41 | 34.06 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 28.7 | 32.78 |
| Solyc04g082560.2.1 | Tomato | cytosol | 30.17 | 31.84 |
| HORVU2Hr1G122390.1 | Barley | cytosol | 6.48 | 15.33 |
| HORVU0Hr1G015420.3 | Barley | cytosol, plastid | 7.02 | 15.12 |
| HORVU7Hr1G060580.1 | Barley | cytosol, plastid | 4.48 | 13.33 |
| HORVU7Hr1G100500.8 | Barley | cytosol, plastid | 6.25 | 12.76 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | UniProt:A0A287Y1C6 | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 |
| EnsemblPlantsGene:HORVU7Hr1G121230 | EnsemblPlants:HORVU7Hr1G121230.4 | InterPro:IPR000261 | InterPro:IPR002048 | PFAM:PF12763 | ScanProsite:PS00018 |
| PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI000B47F26B | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:653385977..653394964
Molecular Weight (calculated)
139100.0 Da
IEP (calculated)
5.555
GRAVY (calculated)
-0.773
Length
1296 amino acids
Sequence
(BLAST)
(BLAST)
0001: XXXXRISGQE AVAFFKGSGL PQPVLAQIWT YADKNRTGFL GREDFFNSLK LVTVAQSGRQ LTPDIVKSAL FGPAAAKIPA PRINIPTGAP QTNSVASPQQ
0101: PTQALGPRQQ SPVVNGSQGP PGSSLNPQIP QQGHPVRPPQ PPSANTPQVP QPGHPVRPPQ PPSANTPQVP QPGHPVRPPQ PPNANTPPAQ GIAPRPPVGG
0201: GLSGLNQAGS TTANLSTDWF SGKKSASPLG VTLQAPVRGA SQQVNLGTVG IPTQSSTPAA QTPVITTSVK PIPTDLNILS SQPAVNDSKA LVPLGNGSPS
0301: NSSFGVDPFS ATPRPTQNSS FPHVSNGLPG STALGQAAGP HHPPKPMQPG PVQGISSLPS HTGQVPPNQP APKQNQFNSI PSTPGPLSAN IPGGQIPTNQ
0401: KQFQAPWPKI TQADVRKYMI VFIKVDRDRD GKITGEEARN LFLSWRLPRE ILRKVWDLSD QDKDGMLSFK EFCFAVYLME RFREQRPLPD VLPDGIWAEG
0501: ISLPSTGQFA ENPSGPAPHP NAGFASRAMQ GPHPGMPPSS VKQQHRRPLH FDDDTTQAEP QKPKVPALEK HLVGQLSKEE QNALEAKFKE ASDADKKVQE
0601: LEKEILDSRE KTDYYRTKMQ ELILYKSRCD NRFNEVSESM SADKREVQSL AAKYDERCKK VGDVASKLSM DEATFREIQA KKLEIYNSIV KLQKGDGDDE
0701: KLQERANQIQ SELEELVKSL NEQCKRYGLR AKPTTLVELP FGWQPGIQET AAVWDEEWDR FAEDGFSIIK ELTVEVEPPA VKESHPTVED GKVSSNGVST
0801: ATSTEKEDSK SDKTAAAEQT VEPEATGSNG KSELAKNPPV SPAKKAKDGH TNEPDKKPLG TNADSPRATD NVSNDGASDS PVRGDKANSR HSWGPSFDHG
0901: DDNDSLWNFG DKDGENGDSD LFFGPGGLPP IRTGGSTSAS AFGKEQKPMF DSVPGTPMEK SLFDSVPGTP MEKSLFDSVP GTPLQKSVFD YSVPSTPMQN
1001: SSFDYSVPST PMQKSLFDSS VPSTPMQRSL FDSSVPSTPM QKSLFDSSVP STPMQNSFYD SFPSTPMQGS LFDSGPGRVE SPTAGSTYGG GQQKGFFDSS
1101: VPSTPMYNSS FSPRYSEAGD DSSFDTFSQM DSFGAKDSSS FGQPRDSFSR FDSFGSSAEL GGSNDTFGRF DSFRSNADQG GGSSFMRYDS MSSNADQGGG
1201: NNNSFMRYDS MSSNADQGGS NNSSSFMRYD SMSSNADHDR SNTFARFDSM KSTDSHDRGY SFDDDDPFGT GPFKPSKPST ETSSPTRHGT DKWSAF
0101: PTQALGPRQQ SPVVNGSQGP PGSSLNPQIP QQGHPVRPPQ PPSANTPQVP QPGHPVRPPQ PPSANTPQVP QPGHPVRPPQ PPNANTPPAQ GIAPRPPVGG
0201: GLSGLNQAGS TTANLSTDWF SGKKSASPLG VTLQAPVRGA SQQVNLGTVG IPTQSSTPAA QTPVITTSVK PIPTDLNILS SQPAVNDSKA LVPLGNGSPS
0301: NSSFGVDPFS ATPRPTQNSS FPHVSNGLPG STALGQAAGP HHPPKPMQPG PVQGISSLPS HTGQVPPNQP APKQNQFNSI PSTPGPLSAN IPGGQIPTNQ
0401: KQFQAPWPKI TQADVRKYMI VFIKVDRDRD GKITGEEARN LFLSWRLPRE ILRKVWDLSD QDKDGMLSFK EFCFAVYLME RFREQRPLPD VLPDGIWAEG
0501: ISLPSTGQFA ENPSGPAPHP NAGFASRAMQ GPHPGMPPSS VKQQHRRPLH FDDDTTQAEP QKPKVPALEK HLVGQLSKEE QNALEAKFKE ASDADKKVQE
0601: LEKEILDSRE KTDYYRTKMQ ELILYKSRCD NRFNEVSESM SADKREVQSL AAKYDERCKK VGDVASKLSM DEATFREIQA KKLEIYNSIV KLQKGDGDDE
0701: KLQERANQIQ SELEELVKSL NEQCKRYGLR AKPTTLVELP FGWQPGIQET AAVWDEEWDR FAEDGFSIIK ELTVEVEPPA VKESHPTVED GKVSSNGVST
0801: ATSTEKEDSK SDKTAAAEQT VEPEATGSNG KSELAKNPPV SPAKKAKDGH TNEPDKKPLG TNADSPRATD NVSNDGASDS PVRGDKANSR HSWGPSFDHG
0901: DDNDSLWNFG DKDGENGDSD LFFGPGGLPP IRTGGSTSAS AFGKEQKPMF DSVPGTPMEK SLFDSVPGTP MEKSLFDSVP GTPLQKSVFD YSVPSTPMQN
1001: SSFDYSVPST PMQKSLFDSS VPSTPMQRSL FDSSVPSTPM QKSLFDSSVP STPMQNSFYD SFPSTPMQGS LFDSGPGRVE SPTAGSTYGG GQQKGFFDSS
1101: VPSTPMYNSS FSPRYSEAGD DSSFDTFSQM DSFGAKDSSS FGQPRDSFSR FDSFGSSAEL GGSNDTFGRF DSFRSNADQG GGSSFMRYDS MSSNADQGGG
1201: NNNSFMRYDS MSSNADQGGS NNSSSFMRYD SMSSNADHDR SNTFARFDSM KSTDSHDRGY SFDDDDPFGT GPFKPSKPST ETSSPTRHGT DKWSAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.