Factsheet for HORVU7Hr1G100500.8

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G441500.1	Wheat	cytosol	80.79	94.13
TraesCS7D01G430800.1	Wheat	cytosol	80.63	93.94
TraesCS7B01G340200.2	Wheat	cytosol	80.63	93.94
Os06t0687800-01	Rice	plasma membrane	74.65	87.13
EER88852	Sorghum	cytosol	73.86	86.21
Zm00001d014526_P002	Maize	cytosol	73.07	84.83
PGSC0003DMT400034517	Potato	cytosol	35.28	78.05
GSMUA_Achr5P23200_001	Banana	cytosol	65.98	77.45
VIT_00s0516g00020.t01	Wine grape	cytosol	66.46	76.73
KRH51151	Soybean	cytosol	65.51	76.33
KRH02006	Soybean	cytosol	65.2	75.96
HORVU0Hr1G015420.3	Barley	cytosol, plastid	71.34	75.25
KRH11510	Soybean	cytosol	63.46	74.77
KRH36524	Soybean	cytosol	63.15	74.4
AT4G05520.1	Thale cress	cytosol	62.2	72.34
Solyc11g012020.1.1	Tomato	cytosol	62.05	72.03
CDY16689	Canola	cytosol	61.57	71.61
Bra029477.1-P	Field mustard	cytosol	61.57	71.61
CDX94536	Canola	cytosol	61.1	70.93
HORVU2Hr1G122390.1	Barley	cytosol	59.69	69.16
GSMUA_Achr5P23220_001	Banana	cytosol	53.23	66.8
HORVU7Hr1G060580.1	Barley	cytosol, plastid	44.72	65.29
KRH45544	Soybean	cytosol	18.9	51.28
HORVU4Hr1G082280.2	Barley	cytosol	17.01	9.55
HORVU7Hr1G121230.4	Barley	cytosol	12.76	6.25

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287XKH1	ncoils:Coil
InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525	InterPro:G_DYNAMIN_dom
EnsemblPlantsGene:HORVU7Hr1G100500	EnsemblPlants:HORVU7Hr1G100500.8	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222	PFscan:PS51718	PANTHER:PTHR11216
PANTHER:PTHR11216:SF114	SMART:SM00027	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI000B4632AC
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:605149338..605154951

Molecular Weight (calculated)

71168.7 Da

IEP (calculated)

10.057

GRAVY (calculated)

-0.404

Length

635 amino acids

Sequence
(BLAST)

001: RAARQQQATP PRRRRVGWGR TQLNSSQSSN PRGVKAIFEL AVVAPSQAQP VATAHSSRHV PGVTLAAQQG FTFAFPFPFP FPKLQRPAGR RPRREGRGAM
101: EIGGQHPASS CSKEHQKIYR DWFALADSDG DGRITGPDAI RFFAMSSLPR ADLKQVWAIA DSKRLGYLGF SEFITAMQVS SLWRNRGMRY PKTAFSVKDL
201: ISFNPPVMEG LDALLAKSKH LAKRVDHDMD GFPQAQGPST NHWFNSKSSK KIPLTAVTSV IDGLKRLYIE KLKPLEVTYK FNDFVSPLLT NSDFDAKPMV
301: MLLGQYSTGK TTFIKHLLKT SYPGAHIGPE PTTDRFVVVM SGPDERTIPG NTLAVQADMP FSGLTTFGTS FLSKFECSQM PHPLLEHITF VDTPGVLSGE
401: KQRTQRSYEF TGVTSWFAAK CDLILLLFDP HKLDISDEFK RVIGSLRGHD DKIRVVLNKA DQIDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFNDKP
501: VKESAVGPIG KELFEKEQDD LLSDLKDIPK KACDRRINEF VKRARAAKIH AYIIGHLKNQ MPSMMGKAKA QQKLIDNLED EFAKVQREHH LPAGDFPYVE
601: HFREALGGYS IDKFEKVKPK MIQAVDDMLG YDIPE

Best Arabidopsis Sequence Match ( AT3G20290.3 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.