Factsheet for Solyc11g012020.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034517	Potato	cytosol	51.37	97.91
VIT_00s0516g00020.t01	Wine grape	cytosol	77.7	77.27
Os06t0687800-01	Rice	plasma membrane	76.05	76.47
EER88852	Sorghum	cytosol	75.14	75.55
Os02t0158100-01	Rice	cytosol	74.77	75.32
TraesCS7D01G430800.1	Wheat	cytosol	74.77	75.05
TraesCS7B01G340200.2	Wheat	cytosol	74.77	75.05
TraesCS7A01G441500.1	Wheat	cytosol	74.59	74.86
KRH51151	Soybean	cytosol	74.41	74.68
Solyc07g064910.2.1	Tomato	cytosol	74.41	74.68
KRH02006	Soybean	cytosol	74.22	74.5
OQU84412	Sorghum	cytosol	74.22	74.22
TraesCS6D01G121200.1	Wheat	cytosol	74.04	74.04
KRH36524	Soybean	cytosol	72.94	74.03
TraesCS6B01G159700.1	Wheat	cytosol	73.86	73.86
Zm00001d014526_P002	Maize	cytosol	73.86	73.86
GSMUA_Achr4P20130_001	Banana	cytosol	73.31	73.85
Solyc12g014460.1.1	Tomato	cytosol	73.49	73.76
Zm00001d053858_P001	Maize	cytosol, extracellular	73.49	73.49
KRH11510	Soybean	cytosol	71.85	72.91
GSMUA_Achr5P23200_001	Banana	cytosol	72.03	72.83
AT4G05520.1	Thale cress	cytosol	72.58	72.71
CDX94536	Canola	cytosol	72.21	72.21
Bra029477.1-P	Field mustard	cytosol	72.03	72.16
CDY16689	Canola	cytosol	72.03	72.16
Solyc10g006110.2.1	Tomato	cytosol	70.93	71.45
Os04t0669300-01	Rice	plasma membrane	70.75	71.4
EES11620	Sorghum	cytosol	69.29	69.93
TraesCS6A01G131300.2	Wheat	cytosol, plastid	73.67	67.73
TraesCS2D01G544000.1	Wheat	cytosol	67.46	67.58
TraesCS2B01G572600.1	Wheat	cytosol	67.28	67.4
TraesCS2A01G542800.1	Wheat	cytosol	67.09	67.22
HORVU0Hr1G015420.3	Barley	cytosol, plastid	73.49	66.78
HORVU2Hr1G122390.1	Barley	cytosol	66.36	66.24
GSMUA_Achr5P23220_001	Banana	cytosol	60.33	65.22
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	72.39	63.26
HORVU7Hr1G100500.8	Barley	cytosol, plastid	72.03	62.05
GSMUA_Achr3P20110_001	Banana	cytosol	17.0	59.24
Zm00001d001906_P004	Maize	cytosol	66.0	56.76
KRH45544	Soybean	cytosol	23.95	55.98
HORVU7Hr1G060580.1	Barley	cytosol, plastid	43.69	54.94
Solyc02g082540.2.1	Tomato	nucleus	16.27	8.56
Solyc04g082560.2.1	Tomato	cytosol	19.01	8.47
Solyc02g082530.1.1	Tomato	nucleus	0.73	4.12
Solyc08g069130.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	InterPro:Dynamin_SF
InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150
GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0032956	GO:GO:0043231
GO:GO:0051260	InterPro:G_DYNAMIN_dom	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	UniProt:K4D607
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222
PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF76	SMART:SM00027	SMART:SM00054	SUPFAM:SSF47473
SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g012020.1	EnsemblPlants:Solyc11g012020.1.1	UniParc:UPI0002769DE5	SEG:seg	:

Description

EH domain-containing protein 2 [Source:Projected from Arabidopsis thaliana (AT4G05520) UniProtKB/Swiss-Prot;Acc:B3LF48]

Coordinates

chr11:+:4963724..4968395

Molecular Weight (calculated)

61433.0 Da

IEP (calculated)

7.154

GRAVY (calculated)

-0.345

Length

547 amino acids

Sequence
(BLAST)

001: MEVVSVPVAS FTKEEEKIYQ NWFNFADSDG DGRITGNDAI KLFSLSNLSK AELKQVWAIA DSKRQGFLGF NEFVTAMQLI SLAQDGSELS PDLLKSKANM
101: ELLSPPSMEG LDALSSKTNG SLMKDLSGTN GTIQVRPPSP INMFSRKSRK KIQPSLTAVT SVTDGLKKLY NEKLKPLELT YRFNEFSSPA LTESDFDAKP
201: MVMLLGQYST GKTTFIKHLL KCNYPGAHIG PEPTTDRFIV VTSGPDERSI PGNTIAVHAE MPFTDLTKFG GAFLSKFECS QLPHSLLDHI SFVDTPGVLS
301: GEKQRTQRSY DFTGVISWFA AKCDMILLLF DPHKLDISDE FKRVISSLKG HEDKIRVVLN KADQVDTQQL MRVYGALMWS LGKVLNTPEV VRVYIGSFND
401: KPVNEEAVGP MGKGLFEKEQ DDLLDDLIDI PKKACDRRIN EFVKRARAAK IHAYIMGHLK KEMPALMGKS KTQQKLIQNL ENEFEKVQKA FRLPAGDFPS
501: VDHFREVLGH YNITDFEKLK PRMIQAVDDM LSHDIPELLK SFRNPYE

Best Arabidopsis Sequence Match ( AT4G05520.2 )
(BLAST)

001: METSSTISIG SCLKEHQKIY KEWFNIADSD GDGRVSGNDA TKFFAMSKLS RQELKQVWAV ADSKRQGFLG LSEFITAMKL VSLAQEGHEI TSDLLKGSID
101: MKSVELPVLE GLENVVSKQK VSKTNVDVED NVTKPQVTAK TPWFKSKSII KPQVNVVTIV DGLKRLYTEK LKPLEVTYRF NDFASPVLTS SDFDAKPMVM
201: LLGQYSTGKT TFIKHLLGCD YPGAHIGPEP TTDRFVVAMS GPDERTIPGN TMAVQADMPF NGLTSFGGAF LSKFECSQMP HPVLDQITLV DTPGVLSGEK
301: QRMQRSYDFT GVISWFASKC DMILLLFDPH KLDISDEFKR VITSLRGNED KIRVVLNKAD QVDTQQLMRV YGALMWSLGK VLNTPEVVRV YIGSFNDKPI
401: NEVAVGPIGK ELFEKEQNDL LADLMDVPKK ACDRKINEFV KRARSAKINA YIMSHLKKEM PAMMGKSKAQ QRLMDNLEEE FGKVQREFHL PAGDFPSVEH
501: FREVLGGYNI DKFEKLKPKM IQAVDDMLGY DIPDLLKKFR NPYDN

Arabidopsis Description

EHD2EH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:B3LF48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.