Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g082560.2.1 | Tomato | cytosol | 100.0 | 16.21 |
| Solyc02g082530.1.1 | Tomato | nucleus | 1.01 | 2.06 |
| Solyc02g082540.2.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc07g064910.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc10g006110.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc11g012020.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc12g014460.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc08g069130.1.1 | EnsemblPlantsGene:Solyc08g069130.1 | InterPro:At5g43822-like | InterPro:CK2S | ncoils:Coil | PANTHER:PTHR37904 |
| PFAM:PF15011 | SEG:seg | UniParc:UPI000276AED6 | UniProt:K4CMD3 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr8:-:58203672..58204271
Molecular Weight (calculated)
22762.8 Da
IEP (calculated)
5.758
GRAVY (calculated)
-0.174
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVIIKKYQQ RFRKVKEEME KWNELQSRLL SQFNNASSII QRLQILQDSK NYGALTCVEA IQEAVLLKQM NSLQNILLSM NETMEKFHVV VLSLDKMVRD
101: GRQLIKGGSV QKNVKQLQQH VGMKPSIADC LDGLQLLYEM HQSEYRLKLS VISAISAFAL QPSATDDLAA LQQLLDDQPN IPKEEVQVIF EIIFAEEIA
101: GRQLIKGGSV QKNVKQLQQH VGMKPSIADC LDGLQLLYEM HQSEYRLKLS VISAISAFAL QPSATDDLAA LQQLLDDQPN IPKEEVQVIF EIIFAEEIA
001: MEAVIRKWQQ KFRKGKEEME KWEALQVRWV SLFRNASSII QRLQEMQNHG SYGALRCLKG IEDAVVQQQM GQLESLLRSM KNVMEEFWGC VLTFEKLHRD
101: GLQLREIESS KRRVEERIGV KPCITDCLEG LSILYDMHQS EYHLKSSILS VLSCLILKPS PGDLNALQYL VVDQPNIPKD EVQHIFDVIF AEEIK
101: GLQLREIESS KRRVEERIGV KPCITDCLEG LSILYDMHQS EYHLKSSILS VLSCLILKPS PGDLNALQYL VVDQPNIPKD EVQHIFDVIF AEEIK
Arabidopsis Description
Uncharacterized protein At5g43822 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPG7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.