Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g069130.1.1 | Tomato | cytosol | 16.21 | 100.0 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 44.79 | 54.67 |
| KRH60909 | Soybean | endoplasmic reticulum | 42.59 | 49.25 |
| KRH51589 | Soybean | endoplasmic reticulum | 42.18 | 48.14 |
| CDY31869 | Canola | cytosol | 38.11 | 47.23 |
| Bra012247.1-P | Field mustard | cytosol | 38.44 | 47.2 |
| CDY01356 | Canola | cytosol | 37.46 | 46.94 |
| CDX96625 | Canola | cytosol | 36.81 | 46.12 |
| Bra025842.1-P | Field mustard | cytosol | 37.62 | 46.06 |
| CDY66337 | Canola | cytosol | 37.13 | 46.06 |
| CDY29508 | Canola | cytosol | 37.22 | 46.02 |
| AT1G20760.1 | Thale cress | cytosol | 38.03 | 45.83 |
| CDY33644 | Canola | cytosol | 36.16 | 44.67 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 34.28 | 44.46 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 34.45 | 44.43 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 36.48 | 41.75 |
| Os03t0130500-01 | Rice | plasma membrane | 35.18 | 40.45 |
| EER92924 | Sorghum | cytosol | 34.36 | 40.38 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 34.93 | 39.58 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 34.69 | 39.55 |
| Solyc02g082540.2.1 | Tomato | nucleus | 33.47 | 39.52 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 34.93 | 39.39 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 36.16 | 39.12 |
| Os06t0728600-00 | Rice | plasma membrane | 28.34 | 38.93 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 34.85 | 37.84 |
| Zm00001d027503_P036 | Maize | cytosol | 31.11 | 36.0 |
| Zm00001d048338_P035 | Maize | cytosol | 31.68 | 35.85 |
| Zm00001d037125_P009 | Maize | cytosol | 32.0 | 32.53 |
| Zm00001d014862_P002 | Maize | cytosol | 31.76 | 32.2 |
| EER89004 | Sorghum | cytosol | 31.84 | 31.89 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 32.74 | 31.07 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 32.65 | 31.04 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 32.74 | 30.95 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 31.84 | 30.17 |
| Solyc02g082530.1.1 | Tomato | nucleus | 2.12 | 26.8 |
| Solyc12g014460.1.1 | Tomato | cytosol | 8.71 | 19.63 |
| Solyc07g064910.2.1 | Tomato | cytosol | 8.71 | 19.63 |
| Solyc10g006110.2.1 | Tomato | cytosol | 8.55 | 19.34 |
| Solyc11g012020.1.1 | Tomato | cytosol | 8.47 | 19.01 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | InterPro:CK2S | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR000261 | InterPro:IPR002048 |
| UniProt:K4BVY3 | PFAM:PF12763 | PFAM:PF13202 | PFAM:PF15011 | ScanProsite:PS00018 | PFscan:PS50031 |
| PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 |
| EnsemblPlantsGene:Solyc04g082560.2 | EnsemblPlants:Solyc04g082560.2.1 | UniParc:UPI000276686A | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:+:66195457..66211018
Molecular Weight (calculated)
134698.0 Da
IEP (calculated)
5.371
GRAVY (calculated)
-0.636
Length
1228 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGASQGGPN MDQFELFFRR ADLDQDGRIS GVEAVGFLKG SNLPQPVLAQ IWTHADQSRT GYLSRPEFYN ALKLVTVAQS KRELTPDIVK AALYGPASAK
0101: IPAPQINLAA VASPQSNSVG AAPAQQMGAG LPTASQNFGI RGQLPHATGM NQQYLTSQAG HSVRPPIPTA ATASRPQQFV AGMNFPRGGS FTGPGLPNSN
0201: SSNDYLGSRQ AAISTGPTMQ PPNRGMSPLV PPVTQTLQGS LSLPSMTEVN TKATGSSGNG FASDTMFGGE TFSASQSVPK KSSSTPNFSM MSSPTSSAMV
0301: PVTTESHASA KPDPFAAFNT LTRQSPGNQQ PVTPSVSKPN QQASVQNILP VSSSGTPAGS VPPTPEQPQV PWPKMTRAGV QKYAKVFMEV DSDRDGKISG
0401: QQARDLFLNW RLPREVLKQV WDLADQDNDS MLSLREFCVA LYLMERYREG RSLPSTLPNS VMLDETLLAL AGPPTAAYGS TGWGPASGVR PPQGMPGVQP
0501: VAHPGLRSPM QGALPQSDRA MQFNQQNARA TTSVNNSHMD QLSNGEQNMS ESKGEETAAE ENKDESKDKM LLDSKEKLEF YRTKMQDLVL YKSRCDNRLN
0601: EITERALADK REAELLGKKY EEKYKQVAEI ASKLTIEEAS FRDTQERKLE LQQAITKMEQ GGSTDGILQV RADRIQHDLE ELLKALVDRC KKHELNMKST
0701: ALIELPPGWQ PGIPEISAVW DEDWDKFEDE GFSFDVAVPE NSKSTSVQKE SSPTHRESSD SMSNADAKSE NHSAKGNNST VETDLMYMHS DEESKSPQGS
0801: PREQTAFDSP SGEYSDNHFG KSFKTESETD RFDEPGWGTF DNNDDVDSVW GFSAKESDHV KHGEKHFFDS TDFGASPTRT ESPGAESRYQ KNSPFTFEDS
0901: VPGSPLSRAG TSPRYSVGSK DPFFDSFSRY DSFRTNDRAS SPRKETLTRF DSINSASGFD HSRGYSFDDA DPFGSSGPFK VSSESQNTKK SSDHWISSAE
1001: VNTSPAAATN SPRYLSFSGQ LRLGLGKLEM DVIIKKYQQR FRKVKEEMEK WNELQSRLLS QFNNASSIIQ RLQILQDSKN YGALTCVEAI QEAVLLKQMN
1101: SLQNILLSMN ETMEKFHVVV LSLDKMVRDG RQLIKGGSVQ KNVKQLQQHV GMKPSIADCL DGLQLLYEMH QSEYRLKLSV ISAISAFALQ PSATDDLAAL
1201: QQLLDDQPNI PKEEVQVIFE IIFAEEIA
0101: IPAPQINLAA VASPQSNSVG AAPAQQMGAG LPTASQNFGI RGQLPHATGM NQQYLTSQAG HSVRPPIPTA ATASRPQQFV AGMNFPRGGS FTGPGLPNSN
0201: SSNDYLGSRQ AAISTGPTMQ PPNRGMSPLV PPVTQTLQGS LSLPSMTEVN TKATGSSGNG FASDTMFGGE TFSASQSVPK KSSSTPNFSM MSSPTSSAMV
0301: PVTTESHASA KPDPFAAFNT LTRQSPGNQQ PVTPSVSKPN QQASVQNILP VSSSGTPAGS VPPTPEQPQV PWPKMTRAGV QKYAKVFMEV DSDRDGKISG
0401: QQARDLFLNW RLPREVLKQV WDLADQDNDS MLSLREFCVA LYLMERYREG RSLPSTLPNS VMLDETLLAL AGPPTAAYGS TGWGPASGVR PPQGMPGVQP
0501: VAHPGLRSPM QGALPQSDRA MQFNQQNARA TTSVNNSHMD QLSNGEQNMS ESKGEETAAE ENKDESKDKM LLDSKEKLEF YRTKMQDLVL YKSRCDNRLN
0601: EITERALADK REAELLGKKY EEKYKQVAEI ASKLTIEEAS FRDTQERKLE LQQAITKMEQ GGSTDGILQV RADRIQHDLE ELLKALVDRC KKHELNMKST
0701: ALIELPPGWQ PGIPEISAVW DEDWDKFEDE GFSFDVAVPE NSKSTSVQKE SSPTHRESSD SMSNADAKSE NHSAKGNNST VETDLMYMHS DEESKSPQGS
0801: PREQTAFDSP SGEYSDNHFG KSFKTESETD RFDEPGWGTF DNNDDVDSVW GFSAKESDHV KHGEKHFFDS TDFGASPTRT ESPGAESRYQ KNSPFTFEDS
0901: VPGSPLSRAG TSPRYSVGSK DPFFDSFSRY DSFRTNDRAS SPRKETLTRF DSINSASGFD HSRGYSFDDA DPFGSSGPFK VSSESQNTKK SSDHWISSAE
1001: VNTSPAAATN SPRYLSFSGQ LRLGLGKLEM DVIIKKYQQR FRKVKEEMEK WNELQSRLLS QFNNASSIIQ RLQILQDSKN YGALTCVEAI QEAVLLKQMN
1101: SLQNILLSMN ETMEKFHVVV LSLDKMVRDG RQLIKGGSVQ KNVKQLQQHV GMKPSIADCL DGLQLLYEMH QSEYRLKLSV ISAISAFALQ PSATDDLAAL
1201: QQLLDDQPNI PKEEVQVIFE IIFAEEIA
0001: MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL DRQNFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:Q9LM78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.