Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60909 | Soybean | endoplasmic reticulum | 92.57 | 93.79 |
| KRH74100 | Soybean | cytosol | 7.71 | 62.41 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 55.11 | 58.95 |
| AT1G20760.1 | Thale cress | cytosol | 52.04 | 54.96 |
| Bra025842.1-P | Field mustard | cytosol | 50.65 | 54.34 |
| CDY29508 | Canola | cytosol | 49.81 | 53.98 |
| CDY01356 | Canola | cytosol | 49.07 | 53.88 |
| CDY66337 | Canola | cytosol | 49.44 | 53.74 |
| Bra012247.1-P | Field mustard | cytosol | 49.91 | 53.7 |
| CDY31869 | Canola | cytosol | 49.35 | 53.58 |
| CDX96625 | Canola | cytosol | 48.79 | 53.57 |
| CDY33644 | Canola | cytosol | 48.42 | 52.41 |
| PGSC0003DMT400025666 | Potato | cytosol | 7.53 | 50.0 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 40.8 | 46.11 |
| KRH14013 | Soybean | endoplasmic reticulum | 44.15 | 45.81 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 48.23 | 45.73 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 40.24 | 45.72 |
| EER92924 | Sorghum | cytosol | 42.47 | 43.73 |
| KRH74101 | Soybean | endoplasmic reticulum | 34.76 | 43.59 |
| Os03t0130500-01 | Rice | plasma membrane | 43.22 | 43.54 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 42.47 | 42.43 |
| Solyc02g082530.1.1 | Tomato | nucleus | 3.81 | 42.27 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 42.57 | 42.25 |
| Solyc04g082560.2.1 | Tomato | cytosol | 48.14 | 42.18 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 42.66 | 42.15 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 42.66 | 40.58 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 40.24 | 40.35 |
| Os06t0728600-00 | Rice | plasma membrane | 31.69 | 38.14 |
| Zm00001d048338_P035 | Maize | cytosol | 38.38 | 38.06 |
| Zm00001d027503_P036 | Maize | cytosol | 37.17 | 37.7 |
| Zm00001d014862_P002 | Maize | cytosol | 39.68 | 35.26 |
| Zm00001d037125_P009 | Maize | cytosol | 39.31 | 35.02 |
| EER89004 | Sorghum | cytosol | 39.87 | 34.99 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 40.06 | 33.31 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 39.78 | 33.13 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 39.68 | 32.87 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 39.03 | 32.41 |
| KRH45544 | Soybean | cytosol | 5.48 | 25.21 |
| KRH73798 | Soybean | cytosol | 10.69 | 20.95 |
| KRH36524 | Soybean | cytosol | 10.41 | 20.78 |
| KRH51151 | Soybean | cytosol | 10.5 | 20.73 |
| KRH11510 | Soybean | cytosol | 10.32 | 20.59 |
| KRH02006 | Soybean | cytosol | 10.41 | 20.55 |
| KRG98685 | Soybean | cytosol | 9.76 | 19.41 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100784075 | MapMan:22.1.4.7 | EMBL:ACUP02003381 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom |
| InterPro:EH_dom | EnsemblPlantsGene:GLYMA_06G016700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 |
| UniProt:I1K7B7 | InterPro:IPR000261 | InterPro:IPR002048 | EnsemblPlants:KRH51589 | ProteinID:KRH51589 | ProteinID:KRH51589.1 |
| PFAM:PF12763 | PFAM:PF13202 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 |
| SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0002339FED | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:-:1231469..1242345
Molecular Weight (calculated)
117122.0 Da
IEP (calculated)
5.011
GRAVY (calculated)
-0.674
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDQFESFFRR ADLDGDGRIS GAEAVSFFQG SNLPKQVLAQ VWAYADQAKT GFLGRAEFFN ALRLVTVAQS KRDLTPDIVK AALYGPAAAK IPAPQINLAA
0101: VPQQRPNSMP GAGSVGQMGV TAPNLAQSFP YRGQGLAGPG ANPQYYPSQQ NPGMRPPQSM PAGGGLHPQQ GVAGPDISRG VNMGGHSFSN PGVSNDWNNV
0201: RPGMVATRPA GMIPSAALPS STSPVSPMPQ SSPISPMPQS TTVNTKALGV SGNGFSSNSV LGNDFFSDAS STQKQEPAGQ SYSVSNVSSA IVPVSTASQP
0301: ASKQNSLDSL QGAYSSMLPA NSQFQRPQSA PITTQQISPP ASSSPHTPSG MTAGLGNANS DNSQLSWPKM KPTDVQKYTK VFMEVDTDRD GKITGEQARS
0401: LFLSWRLPID VLKKVWDLSD QDNDSMLSLK EFCFALYLME RYREGRPLPQ SLPSNVMFDE TLMSMTGQPK SAYGNAAWGI GQGFRQQQGI PGARPVAPTA
0501: GLRPSVHGSF ARADGTQQPN QQKSGTPVLE DSFLNGEQNI LNSKPQEAAT AEKKFEETQN VILDSKEKIE LYRNKMQELV LYRSRCDNRL NEITERASAD
0601: KREAESLGKK YEEKYKQVAE IVSKLTVEEA KFRDIQDRKV ELQQAIVKMV QGGSADGILQ VRAERIQSDL EELFKALAER CKKHGIDVKS ITMVQLPAGW
0701: QPGIPEGAAL WDEEWDKFED EGFANDLTFA SSKPNPAFID GEQNLSDDNS VHGSPVNANG KQENSANGDY TVEDESYAHS EDDLARSPHS LAGRSTLGSP
0801: SRDFSNAHFG KSFEADAETH RSFDESTWGA FDNNEDVDSV WGFNTKTKDS DFEQGDFFKS DDFGINPVRT GSTHTDGTFQ SKSPFAFDDS VPATPVSKFA
0901: FDDSVPATPV SKFGNSPRYS EAGDHFFDMS RFDSFRHESG YSPQPERLTR FDSISSSSKD FGYNNDKFTR FDSISSSKDF GYNNDKFTRF DSISSSKDFG
1001: YNPETLTRFD SMSSSTDLGF GRQGHARFDS ISSTKDFGHS GPFSFDDSDP FGSSGPFKVS SENHSPKKGS DNWSAF
0101: VPQQRPNSMP GAGSVGQMGV TAPNLAQSFP YRGQGLAGPG ANPQYYPSQQ NPGMRPPQSM PAGGGLHPQQ GVAGPDISRG VNMGGHSFSN PGVSNDWNNV
0201: RPGMVATRPA GMIPSAALPS STSPVSPMPQ SSPISPMPQS TTVNTKALGV SGNGFSSNSV LGNDFFSDAS STQKQEPAGQ SYSVSNVSSA IVPVSTASQP
0301: ASKQNSLDSL QGAYSSMLPA NSQFQRPQSA PITTQQISPP ASSSPHTPSG MTAGLGNANS DNSQLSWPKM KPTDVQKYTK VFMEVDTDRD GKITGEQARS
0401: LFLSWRLPID VLKKVWDLSD QDNDSMLSLK EFCFALYLME RYREGRPLPQ SLPSNVMFDE TLMSMTGQPK SAYGNAAWGI GQGFRQQQGI PGARPVAPTA
0501: GLRPSVHGSF ARADGTQQPN QQKSGTPVLE DSFLNGEQNI LNSKPQEAAT AEKKFEETQN VILDSKEKIE LYRNKMQELV LYRSRCDNRL NEITERASAD
0601: KREAESLGKK YEEKYKQVAE IVSKLTVEEA KFRDIQDRKV ELQQAIVKMV QGGSADGILQ VRAERIQSDL EELFKALAER CKKHGIDVKS ITMVQLPAGW
0701: QPGIPEGAAL WDEEWDKFED EGFANDLTFA SSKPNPAFID GEQNLSDDNS VHGSPVNANG KQENSANGDY TVEDESYAHS EDDLARSPHS LAGRSTLGSP
0801: SRDFSNAHFG KSFEADAETH RSFDESTWGA FDNNEDVDSV WGFNTKTKDS DFEQGDFFKS DDFGINPVRT GSTHTDGTFQ SKSPFAFDDS VPATPVSKFA
0901: FDDSVPATPV SKFGNSPRYS EAGDHFFDMS RFDSFRHESG YSPQPERLTR FDSISSSSKD FGYNNDKFTR FDSISSSKDF GYNNDKFTRF DSISSSKDFG
1001: YNPETLTRFD SMSSSTDLGF GRQGHARFDS ISSTKDFGHS GPFSFDDSDP FGSSGPFKVS SENHSPKKGS DNWSAF
0001: MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL DRQNFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:Q9LM78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.