Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH44443 | Soybean | cytosol | 87.92 | 89.12 |
| KRH09738 | Soybean | cytosol | 85.23 | 86.39 |
| VIT_09s0002g06730.t01 | Wine grape | cytosol, extracellular, plastid | 80.54 | 81.63 |
| PGSC0003DMT400073364 | Potato | cytosol | 78.52 | 79.59 |
| Solyc03g116600.2.1 | Tomato | cytosol | 78.52 | 79.59 |
| Solyc06g068080.2.1 | Tomato | cytosol | 78.52 | 79.59 |
| PGSC0003DMT400001702 | Potato | cytosol | 77.85 | 78.91 |
| AT1G15370.1 | Thale cress | extracellular | 76.51 | 77.55 |
| Bra026139.1-P | Field mustard | extracellular | 75.84 | 76.87 |
| CDY71251 | Canola | extracellular | 75.84 | 76.87 |
| CDY55980 | Canola | extracellular | 75.84 | 76.87 |
| CDY36552 | Canola | extracellular | 75.84 | 76.87 |
| Bra026769.1-P | Field mustard | extracellular | 75.84 | 76.87 |
| TraesCS5B01G559500.1 | Wheat | cytosol | 75.17 | 76.19 |
| GSMUA_Achr8P14590_001 | Banana | cytosol | 74.5 | 75.51 |
| TraesCS5D01G565700.1 | Wheat | cytosol | 74.5 | 75.51 |
| TraesCS4A01G319600.1 | Wheat | cytosol | 74.5 | 75.51 |
| EER90485 | Sorghum | cytosol | 74.5 | 75.51 |
| Zm00001d034893_P001 | Maize | mitochondrion | 73.83 | 74.83 |
| GSMUA_Achr4P05640_001 | Banana | cytosol | 73.83 | 74.83 |
| HORVU6Hr1G069160.1 | Barley | extracellular | 42.95 | 73.56 |
| HORVU2Hr1G112780.2 | Barley | extracellular | 42.28 | 72.41 |
| HORVU7Hr1G058240.1 | Barley | cytosol | 36.24 | 72.0 |
| HORVU3Hr1G098440.1 | Barley | cytosol | 36.24 | 72.0 |
| HORVU3Hr1G030140.1 | Barley | extracellular | 40.94 | 70.11 |
| HORVU7Hr1G068500.1 | Barley | cytosol | 34.9 | 69.33 |
| CDY39638 | Canola | cytosol | 75.84 | 68.9 |
| HORVU3Hr1G032710.2 | Barley | extracellular | 42.95 | 65.31 |
Protein Annotations
| EMBL:ACUP02004151 | EnsemblPlants:KRH47463 | EnsemblPlantsGene:GLYMA_07G031300 | EntrezGene:100306313 | Gene3D:3.30.450.60 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016192 | InterPro:Longin-like_dom_sf | PANTHER:PTHR11043 | PANTHER:PTHR11043:SF1 | ProteinID:KRH47463 |
| ProteinID:KRH47463.1 | SUPFAM:SSF64356 | UniParc:UPI0006EDBDD1 | UniProt:A0A0R0IYU4 | MapMan:22.1.4.3 | : |
Description
hypothetical protein
Coordinates
chr7:+:2479399..2482286
Molecular Weight (calculated)
17217.1 Da
IEP (calculated)
5.728
GRAVY (calculated)
0.150
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFRLDSKWV FDLDFVGIIC FHGVPAEERL HWRSFLVKLG ADNLKGVKNE ELLVACHKSV YIVYTVLGDV SIYVVGKDEY DELALSEVIF VITSAVKDVC
101: GKLPSERLFL DKYGRICLCL DEIVWQGYLE NTEKDRIKRL IRLKPPTEF
101: GKLPSERLFL DKYGRICLCL DEIVWQGYLE NTEKDRIKRL IRLKPPTEF
001: MILAVLFANS VGNVLIERFN GVPAEERLHW RSFLVKLGAD NLKGVKNEEL LVACHKSVYI VYTMLGDVSI FLVGKDEYDE LALAETIYII TAAVKDVCGK
101: PPTERVFLDK YGRICLCLDE IVWNGLLENT DKDRIKRLIR LKPPSEV
101: PPTERVFLDK YGRICLCLDE IVWNGLLENT DKDRIKRLIR LKPPSEV
Arabidopsis Description
F9L1.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI32]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.