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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • cytosol 2
  • extracellular 3
  • nucleus 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026769.1-P Field mustard extracellular 100.0 100.0
CDY36552 Canola extracellular 100.0 100.0
AT1G15370.1 Thale cress extracellular 95.24 95.24
KRH44443 Soybean cytosol 85.71 85.71
Solyc06g068080.2.1 Tomato cytosol 85.03 85.03
PGSC0003DMT400073364 Potato cytosol 85.03 85.03
Solyc03g116600.2.1 Tomato cytosol 84.35 84.35
VIT_09s0002g06730.t01 Wine grape cytosol, extracellular, plastid 83.67 83.67
PGSC0003DMT400001702 Potato cytosol 82.99 82.99
EER90485 Sorghum cytosol 80.95 80.95
TraesCS5B01G559500.1 Wheat cytosol 80.95 80.95
Zm00001d034893_P001 Maize mitochondrion 80.27 80.27
TraesCS5D01G565700.1 Wheat cytosol 80.27 80.27
TraesCS4A01G319600.1 Wheat cytosol 80.27 80.27
GSMUA_Achr8P14590_001 Banana cytosol 77.55 77.55
KRH09738 Soybean cytosol 76.19 76.19
GSMUA_Achr4P05640_001 Banana cytosol 76.19 76.19
KRH47463 Soybean extracellular 76.87 75.84
HORVU7Hr1G058240.1 Barley cytosol 34.01 66.67
HORVU6Hr1G069160.1 Barley extracellular 39.46 66.67
HORVU3Hr1G098440.1 Barley cytosol 34.01 66.67
HORVU2Hr1G112780.2 Barley extracellular 38.78 65.52
HORVU7Hr1G068500.1 Barley cytosol 32.65 64.0
HORVU3Hr1G030140.1 Barley extracellular 37.41 63.22
HORVU3Hr1G032710.2 Barley extracellular 39.46 59.18
Protein Annotations
EnsemblPlants:Bra026139.1EnsemblPlants:Bra026139.1-PEnsemblPlantsGene:Bra026139Gene3D:3.30.450.60GO:GO:0006810GO:GO:0008150
GO:GO:0016192InterPro:Longin-like_dom_sfPANTHER:PTHR11043PANTHER:PTHR11043:SF1SUPFAM:SSF64356UniParc:UPI000253F03F
UniProt:M4EBI0MapMan:22.1.4.3::::
Description
AT1G15370 (E=2e-077) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); Has 48 Blast hits to 48 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 39; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Coordinates
chrA06:+:5905207..5906236
Molecular Weight (calculated)
16589.4 Da
IEP (calculated)
5.314
GRAVY (calculated)
0.216
Length
147 amino acids
Sequence
(BLAST)
001: MILAVLFANS VGNVLIERFN GVPAEERLTW RSFLVKLGAE NLKGVKNEEL LVACHKSVYI VYTMLGDVSI FLVGKDEYDE LALAEAIFII TGAVKDICGK
101: PPTERVFLDK YGRICLCLDE IVWNGLLENT DKDRIKRLIR LKPPSEF
Best Arabidopsis Sequence Match ( AT1G15370.1 )
(BLAST)
001: MILAVLFANS VGNVLIERFN GVPAEERLHW RSFLVKLGAD NLKGVKNEEL LVACHKSVYI VYTMLGDVSI FLVGKDEYDE LALAETIYII TAAVKDVCGK
101: PPTERVFLDK YGRICLCLDE IVWNGLLENT DKDRIKRLIR LKPPSEV
Arabidopsis Description
F9L1.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI32]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.