Factsheet for Bra026769.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
cytosol 2
extracellular 3
nucleus 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001174.1-P
Bra001929.1-P
Bra002473.1-P
Bra002662.1-P
Bra002727.1-P
Bra003705.1-P
Bra006369.1-P
Bra006775.1-P
Bra006819.1-P
Bra008283.1-P
Bra009790.1-P
Bra010799.1-P
Bra012247.1-P
Bra012553.1-P
Bra013385.1-P
Bra015169.1-P
Bra015717.1-P
Bra016455.1-P
Bra017408.1-P
Bra020378.1-P
Bra020966.1-P
Bra022067.1-P
Bra023169.1-P
Bra025842.1-P
Bra028351.1-P
Bra028357.1-P
Bra030529.1-P
Bra032422.1-P
Bra036092.1-P
Bra036523.1-P
Bra040242.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G15370.1	Bra030529.1-P	AT1G03330.1	24529374
AT1G15370.1	Bra012247.1-P	AT1G20760.1	24529374
AT1G15370.1	Bra016455.1-P	AT1G20760.1	24529374
AT1G15370.1	Bra025842.1-P	AT1G20760.1	24529374
AT1G15370.1	Bra023169.1-P	AT1G31230.1	24529374
AT1G15370.1	Bra003705.1-P	AT1G76860.1	24529374
AT1G15370.1	Bra008283.1-P	AT1G76860.1	24529374
AT1G15370.1	Bra015717.1-P	AT1G76860.1	24529374
AT1G15370.1	Bra015169.1-P	AT2G05830.1	24529374
AT1G15370.1	Bra022067.1-P	AT3G01780.1	24529374
AT1G15370.1	Bra001929.1-P	AT3G24140.1	21798944
AT1G15370.1	Bra028351.1-P	AT3G24140.1	21798944
AT1G15370.1	Bra028357.1-P	AT3G24140.1	21798944
AT1G15370.1	Bra036092.1-P	AT3G50590.1	24529374
AT1G15370.1	Bra012553.1-P	AT4G19210.1	24529374
AT1G15370.1	Bra013385.1-P	AT4G19210.1	24529374
AT1G15370.1	Bra020966.1-P	AT4G19210.1	24529374
AT1G15370.1	Bra006369.1-P	AT5G05780.1	24529374
AT1G15370.1	Bra017408.1-P	AT5G05780.1	24529374
AT1G15370.1	Bra032422.1-P	AT5G05780.1	24529374
AT1G15370.1	Bra009790.1-P	AT5G24710.1	24529374
AT1G15370.1	Bra010799.1-P	AT5G24710.1	24529374
AT1G15370.1	Bra036523.1-P	AT5G24710.1	24529374
AT1G15370.1	Bra001174.1-P	AT5G26360.1	24529374
AT1G15370.1	Bra040242.1-P	AT5G26360.1	24529374
AT1G15370.1	Bra002727.1-P	AT5G57460.1	24529374
AT1G15370.1	Bra006819.1-P	AT5G57460.1	24529374
AT1G15370.1	Bra002662.1-P	AT5G58290.1	24529374
AT1G15370.1	Bra006775.1-P	AT5G58290.1	24529374
AT1G15370.1	Bra020378.1-P	AT5G58290.1	24529374
AT1G15370.1	Bra002473.1-P	AT5G60540.1	24529374

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026139.1-P	Field mustard	extracellular	100.0	100.0
CDY55980	Canola	extracellular	100.0	100.0
AT1G15370.1	Thale cress	extracellular	95.24	95.24
CDY39638	Canola	cytosol	100.0	89.63
KRH44443	Soybean	cytosol	85.71	85.71
Solyc06g068080.2.1	Tomato	cytosol	85.03	85.03
PGSC0003DMT400073364	Potato	cytosol	85.03	85.03
Solyc03g116600.2.1	Tomato	cytosol	84.35	84.35
VIT_09s0002g06730.t01	Wine grape	cytosol, extracellular, plastid	83.67	83.67
PGSC0003DMT400001702	Potato	cytosol	82.99	82.99
EER90485	Sorghum	cytosol	80.95	80.95
TraesCS5B01G559500.1	Wheat	cytosol	80.95	80.95
Zm00001d034893_P001	Maize	mitochondrion	80.27	80.27
TraesCS5D01G565700.1	Wheat	cytosol	80.27	80.27
TraesCS4A01G319600.1	Wheat	cytosol	80.27	80.27
GSMUA_Achr8P14590_001	Banana	cytosol	77.55	77.55
KRH09738	Soybean	cytosol	76.19	76.19
GSMUA_Achr4P05640_001	Banana	cytosol	76.19	76.19
KRH47463	Soybean	extracellular	76.87	75.84
HORVU7Hr1G058240.1	Barley	cytosol	34.01	66.67
HORVU6Hr1G069160.1	Barley	extracellular	39.46	66.67
HORVU3Hr1G098440.1	Barley	cytosol	34.01	66.67
HORVU2Hr1G112780.2	Barley	extracellular	38.78	65.52
HORVU7Hr1G068500.1	Barley	cytosol	32.65	64.0
HORVU3Hr1G030140.1	Barley	extracellular	37.41	63.22
HORVU3Hr1G032710.2	Barley	extracellular	39.46	59.18

Protein Annotations

EnsemblPlants:Bra026769.1	EnsemblPlants:Bra026769.1-P	EnsemblPlantsGene:Bra026769	Gene3D:3.30.450.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0016192	InterPro:Longin-like_dom_sf	PANTHER:PTHR11043	PANTHER:PTHR11043:SF1	SUPFAM:SSF64356	UniParc:UPI000253F03F
UniProt:M4EBI0	MapMan:22.1.4.3	:	:	:	:

Description

AT1G15370 (E=2e-077) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); Has 48 Blast hits to 48 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 39; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

Coordinates

chrA09:-:33619454..33620305

Molecular Weight (calculated)

16589.4 Da

IEP (calculated)

5.314

GRAVY (calculated)

0.216

Length

147 amino acids

Sequence
(BLAST)

001: MILAVLFANS VGNVLIERFN GVPAEERLTW RSFLVKLGAE NLKGVKNEEL LVACHKSVYI VYTMLGDVSI FLVGKDEYDE LALAEAIFII TGAVKDICGK
101: PPTERVFLDK YGRICLCLDE IVWNGLLENT DKDRIKRLIR LKPPSEF

Best Arabidopsis Sequence Match ( AT1G15370.1 )
(BLAST)

001: MILAVLFANS VGNVLIERFN GVPAEERLHW RSFLVKLGAD NLKGVKNEEL LVACHKSVYI VYTMLGDVSI FLVGKDEYDE LALAETIYII TAAVKDVCGK
101: PPTERVFLDK YGRICLCLDE IVWNGLLENT DKDRIKRLIR LKPPSEV

Arabidopsis Description

F9L1.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI32]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.