Factsheet for Bra022067.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000163.1-P
Bra002427.1-P
Bra002727.1-P
Bra003009.1-P
Bra006819.1-P
Bra009790.1-P
Bra010799.1-P
Bra012247.1-P
Bra016455.1-P
Bra017039.1-P
Bra022067.1-P
Bra025842.1-P
Bra026139.1-P
Bra026769.1-P
Bra036092.1-P
Bra036523.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01780.1	Bra026139.1-P	AT1G15370.1	24529374
AT3G01780.1	Bra026769.1-P	AT1G15370.1	24529374
AT3G01780.1	Bra012247.1-P	AT1G20760.1	24529374
AT3G01780.1	Bra016455.1-P	AT1G20760.1	24529374
AT3G01780.1	Bra025842.1-P	AT1G20760.1	24529374
AT3G01780.1	Bra000163.1-P	AT2G40060.1	21187379
AT3G01780.1	Bra017039.1-P	AT2G40060.1	21187379
AT3G01780.1	Bra022067.1-P	AT3G01780.1	21187379
AT3G01780.1	Bra036092.1-P	AT3G50590.1	24529374
AT3G01780.1	Bra002427.1-P	AT5G22770.1	24529374
AT3G01780.1	Bra009790.1-P	AT5G24710.1	24529374
AT3G01780.1	Bra010799.1-P	AT5G24710.1	24529374
AT3G01780.1	Bra036523.1-P	AT5G24710.1	24529374
AT3G01780.1	Bra003009.1-P	AT5G54160.1	24529374
AT3G01780.1	Bra002727.1-P	AT5G57460.1	24529374
AT3G01780.1	Bra006819.1-P	AT5G57460.1	24529374

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37153	Canola	cytosol, endoplasmic reticulum, nucleus	95.89	97.94
AT3G01780.1	Thale cress	cytosol	93.2	94.39
KRG94459	Soybean	endoplasmic reticulum, nucleus	80.86	82.95
KRH06999	Soybean	endoplasmic reticulum	80.44	82.3
Solyc11g068640.1.1	Tomato	nucleus	79.6	81.65
VIT_14s0171g00280.t01	Wine grape	cytosol, nucleus, plastid	80.27	81.09
GSMUA_Achr6P17830_001	Banana	cytosol	72.8	77.41
GSMUA_Achr10P...	Banana	cytosol	72.46	76.98
Os11t0175900-01	Rice	nucleus, plasma membrane	49.79	76.32
Zm00001d004785_P001	Maize	mitochondrion	49.29	76.23
HORVU4Hr1G019290.1	Barley	cytosol	56.51	75.03
EES09396	Sorghum	cytosol	68.93	71.14
TraesCS4B01G094200.1	Wheat	unclear	68.68	70.88
TraesCS4D01G091000.1	Wheat	golgi	68.51	70.71
TraesCS4A01G222200.1	Wheat	cytosol	68.43	70.69
Os02t0793100-01	Rice	plasma membrane	67.67	69.84
Zm00001d053028_P001	Maize	mitochondrion	63.06	64.97
Zm00001d004784_P001	Maize	cytosol	19.06	59.42

Protein Annotations

MapMan:22.1.4.1	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra022067	EnsemblPlants:Bra022067.1	EnsemblPlants:Bra022067.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006810	GO:GO:0006897
GO:GO:0007275	GO:GO:0008150	GO:GO:0009504	GO:GO:0009506	GO:GO:0009524	GO:GO:0009555
GO:GO:0016020	GO:GO:0042802	UniProt:M4DZX0	SUPFAM:SSF48371	UniParc:UPI0002545F4F	SEG:seg

Description

AT3G01780 (E=0.0) TPLATE | TPLATE; binding

Coordinates

chrA02:+:19007765..19011748

Molecular Weight (calculated)

132342.0 Da

IEP (calculated)

6.055

GRAVY (calculated)

-0.160

Length

1191 amino acids

Sequence
(BLAST)

0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPSFSLP KLISDCSAEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVSLLD KVSTWWGRIG QNMIDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW KKRSALMARS LVLPVETFRS TVFPLVFAVK AVASGSVEFR STVFTLVFAV KAGASGSVGV IRQLSKANTS
0301: GANAAAVVDS NAEKLVGVSD LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS
0401: LFRRLLLMVR NLRAESDRMH ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKFSG
0501: MESRVIGALA YGTGYGALNW TEPALEVVEV CRPCVKWDCD GRTYAIDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQMLN ETRLQNLQRE LVKDLQEVNT
0601: PRILGRLIWT IAEHIDLEGL DPLLADDPDD PLNIIIANMH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLI TKELEEYRNH AAADTVSKHQ
0701: TRLILQRIKY VSNLPERKWA GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPSEL TLFLAKGANS TSIKVPPTAY PLTGSSDPCY
0801: IEAYHLADTN DGRVTLHLKI INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVHCSVTVG VSQFERCGFW VQVLYYPFRG ARGDYDGDYL
0901: EEDPQMMKQK RGSRSELGEP VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYTYEGSGF MATAAQQYGA SPFLSGLNSL SSKPFHRVCS
1001: HIIRTVAGFQ LCYAAKTWHG GFVGMMIFGA SEVSRNVDLG DETTTMMCKF VVRASEASIT KQIESDVQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME
1101: RIALLKAAQP KKTPKTQEEN ESEDEDDDDE EDDEEKEKKE KEKEEEKKKK EKEKGTLSKL TAEETEHMAL QAAVLQEWHM LCKDRKLTKN N

Best Arabidopsis Sequence Match ( AT3G01780.1 )
(BLAST)

0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN

Arabidopsis Description

TPLATEProtein TPLATE [Source:UniProtKB/Swiss-Prot;Acc:F4J8D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.