Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
23777608
plasma membrane: 27800704 |
msms PMID:
23777608
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004785_P001 | Maize | mitochondrion | 92.54 | 93.38 |
| HORVU4Hr1G019290.1 | Barley | cytosol | 94.47 | 81.83 |
| TraesCS4D01G091000.1 | Wheat | golgi | 94.59 | 63.69 |
| TraesCS4B01G094200.1 | Wheat | unclear | 94.47 | 63.6 |
| EES09396 | Sorghum | cytosol | 94.47 | 63.6 |
| TraesCS4A01G222200.1 | Wheat | cytosol | 94.21 | 63.49 |
| Os02t0793100-01 | Rice | plasma membrane | 93.82 | 63.17 |
| GSMUA_Achr10P... | Banana | cytosol | 82.75 | 57.36 |
| GSMUA_Achr6P17830_001 | Banana | cytosol | 81.85 | 56.79 |
| Zm00001d053028_P001 | Maize | mitochondrion | 81.85 | 55.02 |
| KRG94459 | Soybean | endoplasmic reticulum, nucleus | 78.89 | 52.8 |
| KRH06999 | Soybean | endoplasmic reticulum | 78.64 | 52.49 |
| VIT_14s0171g00280.t01 | Wine grape | cytosol, nucleus, plastid | 79.54 | 52.42 |
| Solyc11g068640.1.1 | Tomato | nucleus | 77.99 | 52.2 |
| CDY37153 | Canola | cytosol, endoplasmic reticulum, nucleus | 76.58 | 51.03 |
| AT3G01780.1 | Thale cress | cytosol | 77.22 | 51.02 |
| CDX87673 | Canola | cytosol | 76.19 | 50.6 |
| Bra022067.1-P | Field mustard | nucleus | 76.32 | 49.79 |
| CDX91928 | Canola | cytosol | 2.7 | 44.68 |
| Zm00001d004784_P001 | Maize | cytosol | 0.51 | 1.05 |
Protein Annotations
| EnsemblPlants:Os11t0175900-01 | EnsemblPlantsGene:Os11g0175900 | GO:GO:0006810 | GO:GO:0006897 | GO:GO:0008150 | InterPro:TPLATE |
| PANTHER:PTHR36029 | ProteinID:BAF27726.1 | ProteinID:BAT12912.1 | SEG:seg | UniParc:UPI0000DD9B50 | UniProt:Q0IU89 |
| MapMan:22.1.4.1 | : | : | : | : | : |
Description
Similar to TPLATE; binding. (Os11t0175900-01)
Coordinates
chr11:-:3782692..3787314
Molecular Weight (calculated)
87241.1 Da
IEP (calculated)
6.043
GRAVY (calculated)
-0.299
Length
777 amino acids
Sequence
(BLAST)
(BLAST)
001: SLFKRLLQMV RNLRAESDRM HALACICRTA LCVDLFAKES VRRGQKPVPG TDVISLFEDV RAKDDLNSIT SKSLFREELV ASLVESCFQL SLPLPEQNNS
101: GTESRVIGAL AYGTGYGALN WTEPALDVVE VCRPCVLWDC NGRTYAIDCY LKLLVRLCHI YDTRGGVKTI KAGASQDQIL NETRLRNLQL QLIRDLREVH
201: TPRISSRLIW AISEHFDLEG LDPLLADDPE DPLNIIISNM HKILFNTESS TTTSNRIQDM QSVLICAQRL GTRNARAGQL LSKELEEYRA STSADFVTKH
301: QSRYVLQIIK YVTSHPDNRW VGVGDATGDY PFSHHKLTVQ FSEASAAQDR KLEGLVHKAI LELWRPSPTQ LSLLQTKGIG TLHKELPKAY TLTGSSDPCY
401: IEAYHLADPT DGRITLHLKI LNLTEPELNR VDIRVGLSGA LYYMDGFSRT VRHLRNLVSQ DPVQSSVTVG VSHFERCSLW VQVLYYPFDG SVGSTDYEGD
501: YEESSQMTRQ KRAFRAELGE PVVLRCQPYK IPLAELLLPY ECSPVEYFRL WPSLPAMVEC TGTYTYEGSG FKATAAQQYD SSPFLSGLKS ISSKPFHQVC
601: SHFIRTVAGF QLCYAAKTWF GGFVGMMIFG ASEVSRNVDL GDETTTMICK FVVRASDESI TREIESDLQG WMDDITDGAV EYMPEDEVKS AAAERLKISM
701: ERIALLKAAK PKVPPAKTKE EEEEEKKQNE DLDEFGNPKG PSTLSKLTAE EAEHRALQAA VLQEWHQLCK EKAMKAQ
101: GTESRVIGAL AYGTGYGALN WTEPALDVVE VCRPCVLWDC NGRTYAIDCY LKLLVRLCHI YDTRGGVKTI KAGASQDQIL NETRLRNLQL QLIRDLREVH
201: TPRISSRLIW AISEHFDLEG LDPLLADDPE DPLNIIISNM HKILFNTESS TTTSNRIQDM QSVLICAQRL GTRNARAGQL LSKELEEYRA STSADFVTKH
301: QSRYVLQIIK YVTSHPDNRW VGVGDATGDY PFSHHKLTVQ FSEASAAQDR KLEGLVHKAI LELWRPSPTQ LSLLQTKGIG TLHKELPKAY TLTGSSDPCY
401: IEAYHLADPT DGRITLHLKI LNLTEPELNR VDIRVGLSGA LYYMDGFSRT VRHLRNLVSQ DPVQSSVTVG VSHFERCSLW VQVLYYPFDG SVGSTDYEGD
501: YEESSQMTRQ KRAFRAELGE PVVLRCQPYK IPLAELLLPY ECSPVEYFRL WPSLPAMVEC TGTYTYEGSG FKATAAQQYD SSPFLSGLKS ISSKPFHQVC
601: SHFIRTVAGF QLCYAAKTWF GGFVGMMIFG ASEVSRNVDL GDETTTMICK FVVRASDESI TREIESDLQG WMDDITDGAV EYMPEDEVKS AAAERLKISM
701: ERIALLKAAK PKVPPAKTKE EEEEEKKQNE DLDEFGNPKG PSTLSKLTAE EAEHRALQAA VLQEWHQLCK EKAMKAQ
0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
Arabidopsis Description
TPLATEProtein TPLATE [Source:UniProtKB/Swiss-Prot;Acc:F4J8D3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.