Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
23777608
plasma membrane: 27800704 plasma membrane: 28056797 |
msms PMID:
23777608
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09396 | Sorghum | cytosol | 94.19 | 94.19 |
| TraesCS4D01G091000.1 | Wheat | golgi | 94.02 | 94.02 |
| TraesCS4B01G094200.1 | Wheat | unclear | 93.93 | 93.93 |
| TraesCS4A01G222200.1 | Wheat | cytosol | 93.76 | 93.84 |
| Os11t0175900-01 | Rice | nucleus, plasma membrane | 63.17 | 93.82 |
| Zm00001d004785_P001 | Maize | mitochondrion | 62.05 | 92.99 |
| HORVU4Hr1G019290.1 | Barley | cytosol | 72.27 | 92.98 |
| Zm00001d004784_P001 | Maize | cytosol | 30.76 | 92.93 |
| Zm00001d053028_P001 | Maize | mitochondrion | 85.1 | 84.95 |
| GSMUA_Achr10P... | Banana | cytosol | 74.44 | 76.63 |
| GSMUA_Achr6P17830_001 | Banana | cytosol | 74.35 | 76.61 |
| KRG94459 | Soybean | endoplasmic reticulum, nucleus | 71.75 | 71.32 |
| VIT_14s0171g00280.t01 | Wine grape | cytosol, nucleus, plastid | 72.36 | 70.82 |
| KRH06999 | Soybean | endoplasmic reticulum | 70.88 | 70.27 |
| Solyc11g068640.1.1 | Tomato | nucleus | 70.28 | 69.85 |
| CDY37153 | Canola | cytosol, endoplasmic reticulum, nucleus | 70.1 | 69.38 |
| CDX87673 | Canola | cytosol | 69.76 | 68.8 |
| AT3G01780.1 | Thale cress | cytosol | 70.02 | 68.71 |
| Bra022067.1-P | Field mustard | nucleus | 69.84 | 67.67 |
| CDX91928 | Canola | cytosol | 1.73 | 42.55 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.4.1 | EntrezGene:4330985 | InterPro:ARM-like | InterPro:ARM-type_fold | ProteinID:BAD19189.1 |
| ProteinID:BAD19657.1 | ProteinID:BAF10280.1 | ProteinID:BAS81331.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0006897 | GO:GO:0008150 | InterPro:IPR011989 | EnsemblPlantsGene:Os02g0793100 | EnsemblPlants:Os02t0793100-01 | PANTHER:PTHR36029 |
| UniProt:Q6K685 | SUPFAM:SSF48371 | InterPro:TPLATE | UniParc:UPI00003757B5 | RefSeq:XP_015625503.1 | SEG:seg |
Description
Armadillo-type fold domain containing protein. (Os02t0793100-01)
Coordinates
chr2:+:33700415..33706332
Molecular Weight (calculated)
127159.0 Da
IEP (calculated)
5.796
GRAVY (calculated)
-0.073
Length
1154 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDLLIAQINT DLRSSDALRQ SSALLQALQQ CAAGRDVSAL ARTVATEILS APSSAVCKRL ALDLLRALPL PPDLLDPLLL SSLRSDLSFP DPDVAASSIA
0101: SFPSLPSHLL PSLLSSAHAD IAAALSSSAE SLRLAAVTSL SSLLPRDDLA LMCSTNPSLM GHATTWWGRL AELALDPADA VAATAFEALA RLFQELDARR
0201: MSRLAGDKLV DGEGALAVRA QWAAEAINFI WSRRNMLIAR SMVMPVERFR VTVYPIVHAA KMVASGMVNT LRQIAKPGDT TIDDSVESSA EKLVGVSDII
0301: SHLLPFLSSL DPPLVFEVGI NMLALADVPG GKPEWASAAT TAILTLWDRQ EFSSMRETIV RAVVTNLHLL DLGMQVSLFK RLLQMVRNLR AESDRMHALA
0401: CICRTALCVD LFAKESVRRG QKPVPGTDVI SLFEDANVKG DLNSITSKSL FREELVASLV ESCFQLSLPL PEQKNSGTES RVIGALAYGT GYGALNWTEP
0501: ALDVVEVCRP CVLWDCGGRT YAIDCYLKLL VRLCHIYDTR GGVKTIKAGA SQDQILNETR LRNLQLQLIK DLREVHTPRI SGRLIWAISE HFDLEGLDPL
0601: LADDPEDPLN IIISNMHKIL FKIDSSTTTS SRIQDVQSVL ICAQRLGSRN ARAGQLLTKE LEEFRASTSA DSVTKHQSRY VLQIIKYLTN HPDNRWVGVG
0701: DATGDYPFSH HKLTVQFLEA SAAQDRKLEG LVHKAIEELW RPNPTQLTLL QMKGIGALHK ELPKTLSLTG SSDPCYIEAY HLADPTDGRI TLHLKILNLT
0801: ELELHRVDIR VGLSGALYYM DGFSRTVRHL RNLVSQDPVQ SSVTVGVSHF ERCSLWVQVL YYPFYGSGGS ADYEGDYAEE DSQTVRQKRS LRPELGEPVV
0901: LRCQPYKIPL AELLLPYECS PVEYFRLWPS LPAMVECTGT YTYEGSGFKA TAAQQYDSSP FLSGLKSISS KPFHQVCSHF IRTVAGFQLC YAAKTWFGGF
1001: VGMMIFGASE VSRNVDLGDD TATMICKFVV RASDESITRE IQSDLQGWLD DITDGAVEYM PEEEVKSAAA ERLKVSMERI ALLKAAKPKV PPAKTKEEEE
1101: EEKKEQEDLD EFGNPKGPST LSKLTAEEAE HRALQAAVLQ EWHQLCKEKA LKAQ
0101: SFPSLPSHLL PSLLSSAHAD IAAALSSSAE SLRLAAVTSL SSLLPRDDLA LMCSTNPSLM GHATTWWGRL AELALDPADA VAATAFEALA RLFQELDARR
0201: MSRLAGDKLV DGEGALAVRA QWAAEAINFI WSRRNMLIAR SMVMPVERFR VTVYPIVHAA KMVASGMVNT LRQIAKPGDT TIDDSVESSA EKLVGVSDII
0301: SHLLPFLSSL DPPLVFEVGI NMLALADVPG GKPEWASAAT TAILTLWDRQ EFSSMRETIV RAVVTNLHLL DLGMQVSLFK RLLQMVRNLR AESDRMHALA
0401: CICRTALCVD LFAKESVRRG QKPVPGTDVI SLFEDANVKG DLNSITSKSL FREELVASLV ESCFQLSLPL PEQKNSGTES RVIGALAYGT GYGALNWTEP
0501: ALDVVEVCRP CVLWDCGGRT YAIDCYLKLL VRLCHIYDTR GGVKTIKAGA SQDQILNETR LRNLQLQLIK DLREVHTPRI SGRLIWAISE HFDLEGLDPL
0601: LADDPEDPLN IIISNMHKIL FKIDSSTTTS SRIQDVQSVL ICAQRLGSRN ARAGQLLTKE LEEFRASTSA DSVTKHQSRY VLQIIKYLTN HPDNRWVGVG
0701: DATGDYPFSH HKLTVQFLEA SAAQDRKLEG LVHKAIEELW RPNPTQLTLL QMKGIGALHK ELPKTLSLTG SSDPCYIEAY HLADPTDGRI TLHLKILNLT
0801: ELELHRVDIR VGLSGALYYM DGFSRTVRHL RNLVSQDPVQ SSVTVGVSHF ERCSLWVQVL YYPFYGSGGS ADYEGDYAEE DSQTVRQKRS LRPELGEPVV
0901: LRCQPYKIPL AELLLPYECS PVEYFRLWPS LPAMVECTGT YTYEGSGFKA TAAQQYDSSP FLSGLKSISS KPFHQVCSHF IRTVAGFQLC YAAKTWFGGF
1001: VGMMIFGASE VSRNVDLGDD TATMICKFVV RASDESITRE IQSDLQGWLD DITDGAVEYM PEEEVKSAAA ERLKVSMERI ALLKAAKPKV PPAKTKEEEE
1101: EEKKEQEDLD EFGNPKGPST LSKLTAEEAE HRALQAAVLQ EWHQLCKEKA LKAQ
0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
Arabidopsis Description
TPLATEProtein TPLATE [Source:UniProtKB/Swiss-Prot;Acc:F4J8D3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.