Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P17830_001 | Banana | cytosol | 91.79 | 91.88 |
| Os11t0175900-01 | Rice | nucleus, plasma membrane | 57.36 | 82.75 |
| Zm00001d004785_P001 | Maize | mitochondrion | 56.65 | 82.47 |
| HORVU4Hr1G019290.1 | Barley | cytosol | 65.3 | 81.61 |
| VIT_14s0171g00280.t01 | Wine grape | cytosol, nucleus, plastid | 82.07 | 78.03 |
| KRG94459 | Soybean | endoplasmic reticulum, nucleus | 79.75 | 77.0 |
| Solyc11g068640.1.1 | Tomato | nucleus | 78.95 | 76.23 |
| TraesCS4D01G091000.1 | Wheat | golgi | 78.06 | 75.82 |
| KRH06999 | Soybean | endoplasmic reticulum | 78.59 | 75.69 |
| TraesCS4B01G094200.1 | Wheat | unclear | 77.88 | 75.65 |
| EES09396 | Sorghum | cytosol | 77.79 | 75.56 |
| TraesCS4A01G222200.1 | Wheat | cytosol | 77.52 | 75.37 |
| Os02t0793100-01 | Rice | plasma membrane | 76.63 | 74.44 |
| CDY37153 | Canola | cytosol, endoplasmic reticulum, nucleus | 76.98 | 74.01 |
| AT3G01780.1 | Thale cress | cytosol | 77.61 | 73.98 |
| CDX87673 | Canola | cytosol | 76.9 | 73.68 |
| Bra022067.1-P | Field mustard | nucleus | 76.98 | 72.46 |
| Zm00001d053028_P001 | Maize | mitochondrion | 70.65 | 68.51 |
| Zm00001d004784_P001 | Maize | cytosol | 20.25 | 59.42 |
| CDX91928 | Canola | cytosol | 1.61 | 38.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P09740_001 | EnsemblPlants:GSMUA_Achr10T09740_001 | EnsemblPlantsGene:GSMUA_Achr10G09740_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0006897 | GO:GO:0008150 | InterPro:ARM-type_fold | InterPro:TPLATE | ncoils:Coil | PANTHER:PTHR36029 |
| SEG:seg | SUPFAM:SSF48371 | UniParc:UPI0002966FA7 | UniProt:M0RGV0 | MapMan:22.1.4.1 | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G09740_001]
Coordinates
chr10:+:19414813..19425484
Molecular Weight (calculated)
124022.0 Da
IEP (calculated)
5.400
GRAVY (calculated)
-0.108
Length
1121 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDILIAQIQA DLRSSDALRQ SGALLQALQQ SAAGRDVSAV ARSTCEEILA SPASAVSKKL AFDLIRSTRL TPDLWDTVCS AVRADLDFPD PDVAAAATLG
0101: CVLARDDLVL LCDTAPGLLD RASAWWDRIA EGTLDRSDAV SCAAFAAVGR LFQEFETKRM SRLAGDKLID GENSLAIRSN WVVAAIDLVW KKRNALMARS
0201: LIIPVESFRA TVFPLVYAAK AVASGSLEVF RKLSRSGESS NNTGTATAVD SSMSAEKHVG VSDVVSHLLP FLSSLDPPLI FEVGINMLSL ADVRGGKPEW
0301: ASASIIAILT LWDRQEFSSA RESIVRAVVT NLHLLDLSMQ VSLFKMLLLM VRNLRAESDR MHALACICRT ALCVDLFAKE SVRRGQKPLP GTDITSLFED
0401: ARIKDDLNSV MSKSLFREEL VASLVESCFQ LSLPLPEQKN SGTEGRVIGA LAYGTGYGAL NWTESALEVV EVCRPCVLWD CDGRTYAIDC YLKLLVRLCH
0501: IYDTRGGVKR IKDGASQEQI LNETRLRNLQ LQLIKDLREV HTPRISARLI WAIAEHFDME GLDPLLADDL EDPLNIIISN IHNVLFNTES SATTANRLQD
0601: VQAILICAQR LGTRNLRAGQ LLSKELEDFR GSTLADSVNK HQSRYILQIL KYVAGHPESR WVGVSETTGD YPFSHHKLTV QFFETSVAQD RKLEGLVHKA
0701: IQELWRHDPS ELSLLLTKGI DSTGHKVPPK PHALTGSSDP CYVEAYHLAD STDGRITLHL KILNLTELEI NRVDIRVGLS GALYFMDGSL QAVRPLRNLV
0801: SQDPVLSSVT VGVSHFERCA LWVQVLYYPF YGSGVSGDYE GDYAEEDSQI LRQKHSQKPE LGEPVILRCQ PYKIPLTDLL LPHKCSPVEY FRLWPSLPAI
0901: LEYTGAYTYE GSGFKATAAQ QYEASPFLSG LRSLASKPFH QVCSHFIRTV AGFQLCYAAK TWYGGFVGMM IFGASEVSRN VDLGDETTTM MCKFVIRASD
1001: PSITKEIGSD LQGWLDDITD GGVEYMPEEE VKTAAAERLR ISMEKIALFK AAKPPPQTPK VEEEEEEEDQ KKKENDDENG NPKEPSTLST LTAEEVEHRA
1101: LQSAVLQEWH ILCKEKAVKV Q
0101: CVLARDDLVL LCDTAPGLLD RASAWWDRIA EGTLDRSDAV SCAAFAAVGR LFQEFETKRM SRLAGDKLID GENSLAIRSN WVVAAIDLVW KKRNALMARS
0201: LIIPVESFRA TVFPLVYAAK AVASGSLEVF RKLSRSGESS NNTGTATAVD SSMSAEKHVG VSDVVSHLLP FLSSLDPPLI FEVGINMLSL ADVRGGKPEW
0301: ASASIIAILT LWDRQEFSSA RESIVRAVVT NLHLLDLSMQ VSLFKMLLLM VRNLRAESDR MHALACICRT ALCVDLFAKE SVRRGQKPLP GTDITSLFED
0401: ARIKDDLNSV MSKSLFREEL VASLVESCFQ LSLPLPEQKN SGTEGRVIGA LAYGTGYGAL NWTESALEVV EVCRPCVLWD CDGRTYAIDC YLKLLVRLCH
0501: IYDTRGGVKR IKDGASQEQI LNETRLRNLQ LQLIKDLREV HTPRISARLI WAIAEHFDME GLDPLLADDL EDPLNIIISN IHNVLFNTES SATTANRLQD
0601: VQAILICAQR LGTRNLRAGQ LLSKELEDFR GSTLADSVNK HQSRYILQIL KYVAGHPESR WVGVSETTGD YPFSHHKLTV QFFETSVAQD RKLEGLVHKA
0701: IQELWRHDPS ELSLLLTKGI DSTGHKVPPK PHALTGSSDP CYVEAYHLAD STDGRITLHL KILNLTELEI NRVDIRVGLS GALYFMDGSL QAVRPLRNLV
0801: SQDPVLSSVT VGVSHFERCA LWVQVLYYPF YGSGVSGDYE GDYAEEDSQI LRQKHSQKPE LGEPVILRCQ PYKIPLTDLL LPHKCSPVEY FRLWPSLPAI
0901: LEYTGAYTYE GSGFKATAAQ QYEASPFLSG LRSLASKPFH QVCSHFIRTV AGFQLCYAAK TWYGGFVGMM IFGASEVSRN VDLGDETTTM MCKFVIRASD
1001: PSITKEIGSD LQGWLDDITD GGVEYMPEEE VKTAAAERLR ISMEKIALFK AAKPPPQTPK VEEEEEEEDQ KKKENDDENG NPKEPSTLST LTAEEVEHRA
1101: LQSAVLQEWH ILCKEKAVKV Q
0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
Arabidopsis Description
TPLATEProtein TPLATE [Source:UniProtKB/Swiss-Prot;Acc:F4J8D3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.