Factsheet for Zm00001d004784_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004784_P001
Zm00001d004785_P001
Zm00001d011483_P004
Zm00001d014862_P002
Zm00001d024416_P001
Zm00001d027333_P018
Zm00001d027503_P036
Zm00001d033368_P007
Zm00001d034893_P001
Zm00001d037125_P009
Zm00001d044026_P011
Zm00001d048087_P001
Zm00001d048338_P035
Zm00001d048511_P008
Zm00001d049541_P001
Zm00001d053028_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01780.1	Zm00001d034893_P001	AT1G15370.1	24529374
AT3G01780.1	Zm00001d014862_P002	AT1G20760.1	24529374
AT3G01780.1	Zm00001d027503_P036	AT1G20760.1	24529374
AT3G01780.1	Zm00001d037125_P009	AT1G20760.1	24529374
AT3G01780.1	Zm00001d048338_P035	AT1G20760.1	24529374
AT3G01780.1	Zm00001d004784_P001	AT3G01780.1	21187379
AT3G01780.1	Zm00001d004785_P001	AT3G01780.1	21187379
AT3G01780.1	Zm00001d053028_P001	AT3G01780.1	21187379
AT3G01780.1	Zm00001d033368_P007	AT3G50590.1	24529374
AT3G01780.1	Zm00001d027333_P018	AT5G22770.1	24529374
AT3G01780.1	Zm00001d048511_P008	AT5G22770.1	24529374
AT3G01780.1	Zm00001d011483_P004	AT5G24710.1	24529374
AT3G01780.1	Zm00001d044026_P011	AT5G24710.1	24529374
AT3G01780.1	Zm00001d048087_P001	AT5G54160.1	24529374
AT3G01780.1	Zm00001d049541_P001	AT5G54160.1	24529374
AT3G01780.1	Zm00001d024416_P001	AT5G57460.1	24529374

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09396	Sorghum	cytosol	97.64	32.32
Zm00001d053028_P001	Maize	mitochondrion	95.55	31.57
TraesCS4B01G094200.1	Wheat	unclear	93.72	31.02
TraesCS4D01G091000.1	Wheat	golgi	93.46	30.94
TraesCS4A01G222200.1	Wheat	cytosol	93.19	30.88
Os02t0793100-01	Rice	plasma membrane	92.93	30.76
GSMUA_Achr6P17830_001	Banana	cytosol	59.69	20.36
GSMUA_Achr10P...	Banana	cytosol	59.42	20.25
CDY37153	Canola	cytosol, endoplasmic reticulum, nucleus	59.42	19.47
CDX87673	Canola	cytosol	59.42	19.4
Bra022067.1-P	Field mustard	nucleus	59.42	19.06
AT3G01780.1	Thale cress	cytosol	58.64	19.05
KRG94459	Soybean	endoplasmic reticulum, nucleus	57.33	18.86
VIT_14s0171g00280.t01	Wine grape	cytosol, nucleus, plastid	57.85	18.74
KRH06999	Soybean	endoplasmic reticulum	56.54	18.56
Solyc11g068640.1.1	Tomato	nucleus	56.02	18.43
HORVU4Hr1G019290.1	Barley	cytosol	27.75	11.82
CDX91928	Canola	cytosol	0.26	2.13
Zm00001d004785_P001	Maize	mitochondrion	1.05	0.52
Os11t0175900-01	Rice	nucleus, plasma membrane	1.05	0.51

Protein Annotations

EnsemblPlants:Zm00001d004784_P001	EnsemblPlants:Zm00001d004784_T001	EnsemblPlantsGene:Zm00001d004784	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989
InterPro:TPLATE	PANTHER:PTHR36029	ProteinID:ONM19581.1	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0008450F81
UniProt:A0A1D6EHH9	MapMan:35.1	:	:	:	:

Description

Protein TPLATE

Coordinates

chr2:+:139072783..139074023

Molecular Weight (calculated)

40779.5 Da

IEP (calculated)

4.925

GRAVY (calculated)

0.358

Length

382 amino acids

Sequence
(BLAST)

001: MMDLLIAQIT TDLRSSDALR QSSALLQALQ QCAAGRDVSA LARTAATEIL SAPSSAVCKR LALDLLRALP LPPDLLDPLL LSSLRSDLSF PDPDVAASSI
101: ASFPSLPSHL LPSLLSSAHA EIANALSSPA ESLRLAAVTS LSSLLPRDDL TLMCSTNPSL MAHATTWWGR LAELALDSAD AVSAGAFEAL ARLFQELEGR
201: RMSRLAGDKL VDGEGALAVR AQWAADAIDF IWSRRNMLIA RSMVMPVESF RVTVYPLVHA AKMVASGVVN TLRRVAKPGD TTIADSVESS AEKLVGVSDI
301: VSHLLPFLSS LDPPLVFEVG INMLALADVP GGKPEWASAA IIAILTLWDR QEFSSMRETI VRAVVTNLHL LDLGMQVLYQ SL

Best Arabidopsis Sequence Match ( AT3G01780.1 )
(BLAST)

0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN

Arabidopsis Description

TPLATEProtein TPLATE [Source:UniProtKB/Swiss-Prot;Acc:F4J8D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.