Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 7
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
23508561
mitochondrion: 27297264 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14778 | Sorghum | plastid | 97.96 | 97.96 |
| Os08t0243900-01 | Rice | plasma membrane, plastid | 89.95 | 89.39 |
| TraesCS2B01G003600.1 | Wheat | plastid | 87.13 | 87.96 |
| TraesCS2A01G014200.1 | Wheat | plastid | 87.44 | 87.72 |
| TraesCS2D01G014900.1 | Wheat | plastid | 87.6 | 87.6 |
| HORVU2Hr1G002480.5 | Barley | cytosol | 56.83 | 84.78 |
| HORVU2Hr1G002410.2 | Barley | plastid | 87.44 | 80.84 |
| GSMUA_Achr3P27960_001 | Banana | plastid | 69.86 | 67.94 |
| VIT_11s0052g00920.t01 | Wine grape | mitochondrion | 56.99 | 58.45 |
| KRG90331 | Soybean | endoplasmic reticulum | 56.36 | 56.98 |
| KRH02873 | Soybean | endoplasmic reticulum, nucleus | 56.04 | 56.67 |
| PGSC0003DMT400029685 | Potato | cytosol, plastid | 55.26 | 55.43 |
| Solyc10g078790.1.1 | Tomato | nucleus | 55.26 | 55.43 |
| CDX88623 | Canola | plastid | 54.79 | 54.45 |
| CDY11868 | Canola | plastid | 54.95 | 54.43 |
| Bra006819.1-P | Field mustard | plastid | 54.79 | 54.28 |
| AT5G57460.1 | Thale cress | cytosol | 54.95 | 54.18 |
| Bra002727.1-P | Field mustard | plastid | 53.85 | 53.59 |
| CDY38299 | Canola | plastid | 54.0 | 53.5 |
| CDY25907 | Canola | plastid | 53.85 | 53.18 |
Protein Annotations
| EntrezGene:100383614 | MapMan:22.1.4.2 | InterPro:AP2_Mu_C_sf | ProteinID:AQK41148.1 | EMBL:BT067809 | UniProt:C0PHP0 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0015031 | GO:GO:0016020 | InterPro:IPR028565 |
| InterPro:MHD | InterPro:Muniscin_C | PFAM:PF10291 | PFscan:PS51072 | PANTHER:PTHR37769 | SUPFAM:SSF49447 |
| UniParc:UPI000195CE65 | EnsemblPlantsGene:Zm00001d024416 | EnsemblPlants:Zm00001d024416_P001 | EnsemblPlants:Zm00001d024416_T001 | SEG:seg | : |
Description
No Description!
Coordinates
chr10:-:70055995..70057908
Molecular Weight (calculated)
67840.1 Da
IEP (calculated)
5.803
GRAVY (calculated)
-0.029
Length
637 amino acids
Sequence
(BLAST)
(BLAST)
001: MACLAISLQP VNGPDILLQT RSWFPVSRAL AAVSAFRLAR LHLARGKQQS SSSSASSASL DAIGDDPLAA ASGQLVVGVE SQYRVVYRLV NSIYVLGVTT
101: AGSDHAAPAV NAFAVADAVN QSVSVVVAAC RGVDVTPEKV HRKYPEVYLA LDLVLHGVGS VRLSQILATI HGDNLARMVN SSPDAEARAR GADPWPVVEH
201: LAQDRHAARE GFSGASFELP QETLAAGDEF SSNIAPATTV ATGDEPPPEE AAPVEKDPFA ASDLINNKPE EALVGGFKKN KETALVVADP AAALAGLEVT
301: TLPPAEATKP TFIGVEGFEG DYGGIEFGND ETSLAEAFEG LNAPFGGGLD ASEFVTTTKK DHKDRTVTGL ELLVASGQPP NAAAGTPLEN LLLTKRAEMT
401: APELFIAEEI NAEFKESILV RVGLKGTIFL RTLPLNKAAG KETEFSFRLE GTSGMKRAAL QSNVLSNLQN GLFHVRTVSK EEPIPLMKYS FLPKHSPLPL
501: RMRLVKRHSG TLLSVMIQYA SNPMLPQPLS NVTFVVKLPV DPTLLNVSPK AVLNRAEKEF RWHISDIPLK GPAGRLRARM PVDQDSKDGE LEVVGMVKFA
601: YQGPFTLSGI KLCPATDGIA QFNEVGHTFS SGSYLCI
101: AGSDHAAPAV NAFAVADAVN QSVSVVVAAC RGVDVTPEKV HRKYPEVYLA LDLVLHGVGS VRLSQILATI HGDNLARMVN SSPDAEARAR GADPWPVVEH
201: LAQDRHAARE GFSGASFELP QETLAAGDEF SSNIAPATTV ATGDEPPPEE AAPVEKDPFA ASDLINNKPE EALVGGFKKN KETALVVADP AAALAGLEVT
301: TLPPAEATKP TFIGVEGFEG DYGGIEFGND ETSLAEAFEG LNAPFGGGLD ASEFVTTTKK DHKDRTVTGL ELLVASGQPP NAAAGTPLEN LLLTKRAEMT
401: APELFIAEEI NAEFKESILV RVGLKGTIFL RTLPLNKAAG KETEFSFRLE GTSGMKRAAL QSNVLSNLQN GLFHVRTVSK EEPIPLMKYS FLPKHSPLPL
501: RMRLVKRHSG TLLSVMIQYA SNPMLPQPLS NVTFVVKLPV DPTLLNVSPK AVLNRAEKEF RWHISDIPLK GPAGRLRARM PVDQDSKDGE LEVVGMVKFA
601: YQGPFTLSGI KLCPATDGIA QFNEVGHTFS SGSYLCI
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.