Factsheet for Zm00001d049597_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14522	Sorghum	mitochondrion	95.61	97.42
TraesCS7B01G206900.1	Wheat	mitochondrion	85.81	88.19
TraesCS7D01G303500.1	Wheat	golgi	85.81	88.19
TraesCS7A01G306600.1	Wheat	mitochondrion	85.64	88.02
Os08t0141400-01	Rice	mitochondrion	51.18	84.87
HORVU7Hr1G073050.3	Barley	plastid	85.98	83.03
Zm00001d012615_P001	Maize	mitochondrion	68.41	70.07
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	27.2	70.0
Zm00001d043266_P002	Maize	mitochondrion	68.24	69.9
KRH49945	Soybean	mitochondrion	67.74	69.14
KRH10751	Soybean	mitochondrion	67.23	69.1
KRH25488	Soybean	peroxisome	47.64	68.95
KRH41931	Soybean	mitochondrion	67.4	68.79
KRH21576	Soybean	mitochondrion	66.89	68.75
CDY16620	Canola	mitochondrion	66.89	68.39
Bra029549.1-P	Field mustard	mitochondrion	66.89	68.39
PGSC0003DMT400057712	Potato	mitochondrion	67.4	68.32
CDY44749	Canola	mitochondrion	66.72	68.22
Solyc02g079170.2.1	Tomato	nucleus	67.23	68.15
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	65.88	67.24
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.16	67.14
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	65.2	67.13
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	56.08	66.0
CDX78714	Canola	plastid	63.01	64.98
Bra006374.1-P	Field mustard	plastid	62.84	64.81
CDX70722	Canola	plastid	62.5	64.57
Zm00001d036557_P002	Maize	mitochondrion	67.06	64.55
Bra023586.1-P	Field mustard	mitochondrion	61.32	64.36
CDY38082	Canola	mitochondrion	62.5	64.35
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	62.5	64.35
AT4G05020.2	Thale cress	mitochondrion	67.06	64.14
AT2G20800.1	Thale cress	mitochondrion	62.67	63.75
KRH62788	Soybean	cytosol	17.4	63.58
Solyc07g054670.2.1	Tomato	unclear	61.15	62.96
Zm00001d037405_P001	Maize	endoplasmic reticulum, extracellular	15.54	55.42
Zm00001d012464_P001	Maize	mitochondrion	29.9	33.71
Zm00001d004457_P001	Maize	mitochondrion	8.11	29.81
Zm00001d021804_P001	Maize	mitochondrion	27.03	26.45

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	UniProt:A0A1D6PWC0	ProteinID:AQK50861.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005509	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR002048
InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR43706
PANTHER:PTHR43706:SF3	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI000843D2CE	EnsemblPlantsGene:Zm00001d049597
EnsemblPlants:Zm00001d049597_P001	EnsemblPlants:Zm00001d049597_T001	SEG:seg	:	:	:

Description

External alternative NAD(P)H-ubiquinone oxidoreductase B4 mitochondrial

Coordinates

chr4:+:36830553..36836546

Molecular Weight (calculated)

66306.4 Da

IEP (calculated)

7.695

GRAVY (calculated)

-0.206

Length

592 amino acids

Sequence
(BLAST)

001: MRWSAFLWEA ASGRRPGVSN LLLVVAAASS GGLVAYADSG SDAAVEQPQL PPRKKVVVLG TGWGGTTFLR NLDSRLYDVQ VISPRNYFAF TPLLPSVTSG
101: TVEPRSIVEP IRRVLEKVCC SAEFIVGSFS LLIGGEIKFW EAECFKIDPQ SKKIHCRSNV GTSLEGNGEF LVDYDYLVVA VGARTNTFNT PGVVENCHFL
201: KEVEDAQKIR RSVMDCFERA SLPFLNEEER KKNLHFVVVG GGPTGVEFAA SLHDFVTEDL SKLYPSIQHL VKISLIEAAD HILTMFDKRI TNFAEDKFGR
301: DGIDVKTGYK VVKVSKDDIT MQNPATGDIS VPYGMAVWST GIGTRPFVVE FMKQIGQANR RVLATDEWLR VRECDGVYAI GDCATINQRK VMEDISEIFR
401: VADKDKSGTL TVKEIQDILD DIYVRYPQVQ LYLKSKQMNG IADLVRSAKG DAEKESVELN IEEFKKALSL VDSQVKFLPA TAQVASQQGQ YLARCFNKMK
501: DAEENPEGPI RIRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWISI GHSSQWLWYS VYATKQISWR TRMLVVSDWT RRFIFGRDSS CI

Best Arabidopsis Sequence Match ( AT4G05020.1 )
(BLAST)

001: MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWVSI GHSSQWLWYS VYASKQVSWR TRVLVVSDWM RRFIFGRDSS SI

Arabidopsis Description

NDB2NAD(P)H dehydrogenase B2 [Source:UniProtKB/TrEMBL;Acc:F4JGL5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.