Factsheet for Zm00001d012464_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01700	Sorghum	mitochondrion	91.43	95.43
Os01t0830100-01	Rice	mitochondrion	75.62	87.06
TraesCS3B01G382500.1	Wheat	mitochondrion	80.57	84.43
TraesCS3A01G349900.1	Wheat	mitochondrion	80.38	84.23
HORVU3Hr1G110990.1	Barley	peroxisome	15.05	84.04
TraesCS3D01G343900.1	Wheat	mitochondrion	80.19	84.03
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	62.86	81.28
CDY70466	Canola	mitochondrion, peroxisome	52.38	78.57
HORVU3Hr1G087850.7	Barley	peroxisome	76.95	77.1
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	23.24	75.31
VIT_19s0027g01030.t01	Wine grape	cytosol	41.71	73.99
HORVU2Hr1G022740.3	Barley	extracellular	18.86	72.26
Solyc06g007160.2.1	Tomato	plastid	67.43	71.52
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	67.24	71.31
HORVU2Hr1G101830.2	Barley	extracellular	21.33	70.44
VIT_06s0004g06760.t01	Wine grape	plastid	66.86	70.34
CDX84870	Canola	mitochondrion	67.43	70.24
Bra022768.1-P	Field mustard	mitochondrion	67.43	70.24
CDY10256	Canola	mitochondrion	67.43	69.55
Bra015560.1-P	Field mustard	mitochondrion	67.43	69.55
AT2G29990.1	Thale cress	mitochondrion	67.24	69.49
CDY06685	Canola	mitochondrion	67.24	69.35
AT1G07180.1	Thale cress	mitochondrion	67.24	69.22
Bra030676.1-P	Field mustard	plastid	65.52	68.12
CDY15606	Canola	plastid	65.33	67.92
CDX86494	Canola	mitochondrion, peroxisome	64.95	67.39
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	35.24	66.31
HORVU5Hr1G020920.4	Barley	extracellular	21.52	64.57
HORVU7Hr1G040660.4	Barley	cytosol	24.0	64.29
HORVU5Hr1G056500.3	Barley	extracellular	20.95	62.86
KRH17976	Soybean	cytosol	22.86	61.86
Zm00001d021804_P001	Maize	mitochondrion	56.57	49.09
Zm00001d037405_P001	Maize	endoplasmic reticulum, extracellular	10.67	33.73
Zm00001d049597_P001	Maize	mitochondrion	33.71	29.9
Zm00001d012615_P001	Maize	mitochondrion	32.38	29.41
Zm00001d043266_P002	Maize	mitochondrion	32.38	29.41
Zm00001d036557_P002	Maize	mitochondrion	33.71	28.78
Zm00001d004457_P001	Maize	mitochondrion	4.38	14.29

Protein Annotations

EnsemblPlants:Zm00001d012464_P001	EnsemblPlants:Zm00001d012464_T001	EnsemblPlantsGene:Zm00001d012464	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:IPR036188	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	PFAM:PF07992	PRINTS:PR00368	ProteinID:AQK99600.1
SEG:seg	SUPFAM:SSF51905	UniParc:UPI0008424668	UniProt:A0A1D6G8Y4	MapMan:2.4.2.1.1	:

Description

npi414aInternal alternative NAD(P)H-ubiquinone oxidoreductase A1 mitochondrial

Coordinates

chr8:-:174970601..174974661

Molecular Weight (calculated)

58003.8 Da

IEP (calculated)

9.369

GRAVY (calculated)

-0.068

Length

525 amino acids

Sequence
(BLAST)

001: MAASSLLRSF TRRSCAGPSA FAYRHHQRQQ PWSPFSTSAA AVTQDEAAKR FPGLGPTAKG EKARVVVLGT GWAGSRLMKD LDTQGYDVVC VAPRNHMVFT
101: PLLASTCVGT LEFRSVAEPV ARIQPAVSKS PGSYFLLARC TGVDPDGHTI DCETVTDGEK DSLEPWKFKV AYDKLVFACG AEASTFGIHG VTDHAIFLRE
201: VHHAQEIRRR LLLNLMLSDL PGISEEEKCR LLHCVVVGGG PTGVEFSGEL SDFIIRDVKQ RYSHVKDYIH VTLIEANEIL SSFDVRLRQY ATKQLIKSGV
301: RLVQGIVKDV QPNKIILDNG EEVPYGLLVW STGVGASPFV KSLPFPKSPG GRIFTRFFNV DRIGVNEWLR VPSVHDVYAI GDCSGFLEST GKEVLPALAQ
401: VVQVSYRNVH STMAVAERQG KYLASLLNHV MKAGGGHANS ETEADLGRPP FVYKHLGSMA TVGRYKALVD LRQSKESRGI SLAGFVSWFI WRSAYLTRVV
501: SWRNRFYVAI NWLTTLLFGR DISRI

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.