Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G101830.2 | Barley | extracellular | 86.13 | 74.21 |
| HORVU5Hr1G020920.4 | Barley | extracellular | 87.59 | 68.57 |
| HORVU5Hr1G056500.3 | Barley | extracellular | 86.13 | 67.43 |
| HORVU7Hr1G040660.4 | Barley | cytosol | 92.7 | 64.8 |
| HORVU3Hr1G087950.4 | Barley | endoplasmic reticulum, vacuole | 75.18 | 63.58 |
| HORVU3Hr1G110990.1 | Barley | peroxisome | 37.23 | 54.26 |
| HORVU7Hr1G076330.1 | Barley | mitochondrion, peroxisome | 76.64 | 37.63 |
| CDY70466 | Canola | mitochondrion, peroxisome | 62.04 | 24.29 |
| VIT_19s0027g01030.t01 | Wine grape | cytosol | 50.37 | 23.31 |
| TraesCS3A01G349900.1 | Wheat | mitochondrion | 81.02 | 22.16 |
| TraesCS3B01G382500.1 | Wheat | mitochondrion | 81.02 | 22.16 |
| TraesCS3D01G343900.1 | Wheat | mitochondrion | 81.02 | 22.16 |
| HORVU3Hr1G087850.7 | Barley | peroxisome | 83.21 | 21.76 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 60.58 | 20.44 |
| Os01t0830100-01 | Rice | mitochondrion | 67.88 | 20.39 |
| EES01700 | Sorghum | mitochondrion | 72.26 | 19.68 |
| Zm00001d012464_P001 | Maize | mitochondrion | 72.26 | 18.86 |
| PGSC0003DMT400010678 | Potato | mitochondrion, peroxisome, plastid | 65.69 | 18.18 |
| Solyc06g007160.2.1 | Tomato | plastid | 65.69 | 18.18 |
| CDY06685 | Canola | mitochondrion | 64.96 | 17.49 |
| Bra015560.1-P | Field mustard | mitochondrion | 64.96 | 17.49 |
| AT1G07180.1 | Thale cress | mitochondrion | 64.96 | 17.45 |
| VIT_06s0004g06760.t01 | Wine grape | plastid | 63.5 | 17.43 |
| CDY15606 | Canola | plastid | 64.23 | 17.43 |
| Bra030676.1-P | Field mustard | plastid | 64.23 | 17.43 |
| Bra022768.1-P | Field mustard | mitochondrion | 63.5 | 17.26 |
| CDX84870 | Canola | mitochondrion | 63.5 | 17.26 |
| CDX86494 | Canola | mitochondrion, peroxisome | 63.5 | 17.19 |
| CDY10256 | Canola | mitochondrion | 63.5 | 17.09 |
| AT2G29990.1 | Thale cress | mitochondrion | 62.77 | 16.93 |
| HORVU2Hr1G040130.1 | Barley | peroxisome | 57.66 | 15.83 |
| KRH17976 | Soybean | cytosol | 21.17 | 14.95 |
| HORVU7Hr1G073050.3 | Barley | plastid | 31.39 | 7.01 |
| HORVU7Hr1G101500.4 | Barley | endoplasmic reticulum | 29.2 | 6.83 |
| HORVU3Hr1G076920.2 | Barley | mitochondrion | 26.28 | 5.89 |
| HORVU4Hr1G058410.1 | Barley | nucleus | 2.92 | 1.18 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G022740.3 | EnsemblPlantsGene:HORVU2Hr1G022740 | Gene3D:3.50.50.100 | InterPro:FAD/NAD-bd_sf | InterPro:IPR036188 | PANTHER:PTHR43706 |
| PANTHER:PTHR43706:SF14 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF51905 | UniParc:UPI000B46C110 | UniProt:A0A287HCM0 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:66391011..66392352
Molecular Weight (calculated)
14970.4 Da
IEP (calculated)
8.947
GRAVY (calculated)
0.159
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLMVCLYGL LELVLHHSSS HCHFLSQLEE DEWLRVPSVP DVFAVGDCCG FLESTRKKVL PALAQVAERQ GLYLARLLNS VMKAGGGHAN SHVKVDLGPK
101: FVYKHLGSMA TVGRYKALVD LRQSKGSKGI SIAGFAN
101: FVYKHLGSMA TVGRYKALVD LRQSKGSKGI SIAGFAN
001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI
Arabidopsis Description
NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.