CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012464_P001	Maize	mitochondrion	95.43	91.43
Os01t0830100-01	Rice	mitochondrion	78.53	86.62
TraesCS3B01G382500.1	Wheat	mitochondrion	84.89	85.23
TraesCS3A01G349900.1	Wheat	mitochondrion	84.49	84.83
TraesCS3D01G343900.1	Wheat	mitochondrion	84.29	84.63
HORVU3Hr1G110990.1	Barley	peroxisome	15.31	81.91
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	66.0	81.77
CDY70466	Canola	mitochondrion, peroxisome	55.27	79.43
HORVU3Hr1G087850.7	Barley	peroxisome	80.52	77.29
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	24.06	74.69
VIT_19s0027g01030.t01	Wine grape	cytosol	43.54	73.99
HORVU2Hr1G022740.3	Barley	extracellular	19.68	72.26
Solyc06g007160.2.1	Tomato	plastid	70.78	71.92
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	70.58	71.72
CDX84870	Canola	mitochondrion	71.37	71.23
Bra022768.1-P	Field mustard	mitochondrion	71.37	71.23
VIT_06s0004g06760.t01	Wine grape	plastid	70.18	70.74
AT2G29990.1	Thale cress	mitochondrion	71.17	70.47
CDY10256	Canola	mitochondrion	71.17	70.33
Bra015560.1-P	Field mustard	mitochondrion	70.78	69.94
HORVU2Hr1G101830.2	Barley	extracellular	22.07	69.81
AT1G07180.1	Thale cress	mitochondrion	70.78	69.8
CDY06685	Canola	mitochondrion	70.58	69.74
Bra030676.1-P	Field mustard	plastid	68.99	68.71
CDY15606	Canola	plastid	68.79	68.51
CDX86494	Canola	mitochondrion, peroxisome	68.39	67.98
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	36.58	65.95
HORVU5Hr1G020920.4	Barley	extracellular	22.27	64.0
HORVU7Hr1G040660.4	Barley	cytosol	24.65	63.27
HORVU5Hr1G056500.3	Barley	extracellular	21.67	62.29
KRH17976	Soybean	cytosol	23.86	61.86
EER97387	Sorghum	mitochondrion	65.41	58.13
EES14522	Sorghum	mitochondrion	35.59	30.81
EER90248	Sorghum	mitochondrion	34.0	29.28
EES01568	Sorghum	mitochondrion	33.2	28.89

Protein Annotations

MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EntrezGene:8085421	UniProt:C5XNZ0	EnsemblPlants:EES01700	ProteinID:EES01700
ProteinID:EES01700.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368
PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	EnsemblPlantsGene:SORBI_3003G343500	SUPFAM:SSF51905	unigene:Sbi.6837	UniParc:UPI0001A845F0
RefSeq:XP_002456580.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:66532578..66536382

Molecular Weight (calculated)

55138.5 Da

IEP (calculated)

9.461

GRAVY (calculated)

-0.040

Length

503 amino acids

Sequence
(BLAST)

001: MAASSLLRSL TRRGCAGPSA FAYRYHQQQP WSPFSTTAAG AAAAGTRDEA AKRFPGLGPT AKGEKARVVV LGTGWAGSRL MKDLDTHGYD MVCVAPRNHM
101: VFTPLLASTC VGTLEFRSVA EPIARIQPAV SKSPGSYFLL ARCTGVDPDS HTIDCETVTD GEKDSLEPWK FKVAYDKLVF ACGAEASTFG IHGVTDHAIF
201: LREVHHAQEI RRRLLLNLML SDVPGISEEE KRRLLHCVVV GGGPTGVEFS GELSDFIIRD VKQRYSHVKD YIHVTLIEAN EILSSFDVRL RQYAIKQLIK
301: SGVRLVQGIV KDVQPSKIIL DNGEEVPYGL LVWSTGVGAS PFVKSLPFPK SPGGRIGVNE WLRVPSVQDV YAIGDCSGFL ESTGKEVLPA LAQVAERQGK
401: YLASLLNHVM KAGGGHANSV TEADLGPPFV YKHLGSMATV GRYKALVDLR KSKESRGISL AGFVSWFIWR SAYLTRVISW RNRFYVAINW LTTLLFGRDI
501: SRI

Best Arabidopsis Sequence Match ( AT2G29990.1 )
(BLAST)

001: MFMIKNLTRI SPNTSSIITR FRNSGSSSLS YTLASRFCTA QETQIQSPAK IPNDVDRSQY SGLPPTREGE KPRVVVLGSG WAGCRLMKGI DTNLYDVVCV
101: SPRNHMVFTP LLASTCVGTL EFRSVAEPIS RIQPAISREP GSFFFLANCS RLDADAHEVH CETLTDGLNT LKPWKFKIAY DKLVIASGAE ASTFGIHGVM
201: ENAIFLREVH HAQEIRRKLL LNLMLSDTPG ISKEEKRRLL HCVVVGGGPT GVEFSGELSD FIMKDVRQRY AHVKDDIHVT LIEARDILSS FDDRLRRYAI
301: KQLNKSGVRF VRGIVKDVQS QKLILDDGTE VPYGLLVWST GVGPSPFVRS LGLPKDPTGR IGIDEWMRVP SVQDVFAIGD CSGYLETTGK PTLPALAQVA
401: EREGKYLANL LNAIGKGNGG RANSAKEIEL GVPFVYKHLG SMATIGRYKA LVDLRESKDA KGISMTGFVS WFIWRSAYLT RVISWRNRFY VAINWFTTFV
501: FGRDISRI

Arabidopsis Description

NDA2Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80874]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.