Factsheet for HORVU3Hr1G087850.7

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G110990.1	Barley	peroxisome	17.18	95.74
TraesCS3D01G343900.1	Wheat	mitochondrion	86.45	90.42
TraesCS3B01G382500.1	Wheat	mitochondrion	86.45	90.42
TraesCS3A01G349900.1	Wheat	mitochondrion	86.26	90.22
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	26.53	85.8
HORVU2Hr1G022740.3	Barley	extracellular	21.76	83.21
Os01t0830100-01	Rice	mitochondrion	71.18	81.8
EES01700	Sorghum	mitochondrion	77.29	80.52
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	61.45	79.31
HORVU2Hr1G101830.2	Barley	extracellular	23.86	78.62
CDY70466	Canola	mitochondrion, peroxisome	51.53	77.14
Zm00001d012464_P001	Maize	mitochondrion	77.1	76.95
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	39.89	74.91
VIT_19s0027g01030.t01	Wine grape	cytosol	41.03	72.64
HORVU5Hr1G020920.4	Barley	extracellular	24.24	72.57
HORVU7Hr1G040660.4	Barley	cytosol	26.91	71.94
HORVU5Hr1G056500.3	Barley	extracellular	23.66	70.86
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	65.84	69.7
Solyc06g007160.2.1	Tomato	plastid	65.27	69.09
Bra022768.1-P	Field mustard	mitochondrion	66.03	68.65
CDX84870	Canola	mitochondrion	66.03	68.65
AT1G07180.1	Thale cress	mitochondrion	66.79	68.63
VIT_06s0004g06760.t01	Wine grape	plastid	65.08	68.34
Bra015560.1-P	Field mustard	mitochondrion	66.22	68.17
CDY06685	Canola	mitochondrion	66.03	67.98
CDY10256	Canola	mitochondrion	65.84	67.78
AT2G29990.1	Thale cress	mitochondrion	65.65	67.72
Bra030676.1-P	Field mustard	plastid	64.69	67.13
CDY15606	Canola	plastid	64.5	66.93
CDX86494	Canola	mitochondrion, peroxisome	63.93	66.21
KRH17976	Soybean	cytosol	21.95	59.28
HORVU2Hr1G040130.1	Barley	peroxisome	56.11	58.92
HORVU7Hr1G073050.3	Barley	plastid	33.97	29.04
HORVU7Hr1G101500.4	Barley	endoplasmic reticulum	32.06	28.67
HORVU4Hr1G058410.1	Barley	nucleus	16.98	26.25
HORVU3Hr1G076920.2	Barley	mitochondrion	30.53	26.19

Protein Annotations

EnsemblPlants:HORVU3Hr1G087850.7	EnsemblPlantsGene:HORVU3Hr1G087850	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:IPR036188
PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	PFAM:PF07992	PRINTS:PR00368	SEG:seg	SUPFAM:SSF51905
SUPFAM:SSF51971	UniParc:UPI000B4805C0	UniProt:A0A287M4Q0	MapMan:2.4.2.1.1	:	:

Description

No Description!

Coordinates

chrchr3H:-:622808614..622812678

Molecular Weight (calculated)

50975.6 Da

IEP (calculated)

8.692

GRAVY (calculated)

0.040

Length

524 amino acids

Sequence
(BLAST)

001: PRPXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXAAAA AAGDAGDGAV LPRGLAGLGP TGKGEKARVV VLGTGWAGSR
101: LMKDLDTSGY DVVCVSPRNH MVFTPLLAST CVGTLEFRSV AEPLARIQPA VSSSPGSYFL LARCTAVDPD AHTIDCETVT EGEKDTLKPW KFKVSYDKLV
201: FGCGAEASTF GIRGVTEHAT FLREVHHAQE IRRKLLLNLM LSDVPGISED EKRRLLHCVV VGGGPTGVEF SGELSDFIIR DVKERYXHVK DYVHVTLIEA
301: NEILSSFDVR LRQYAINQLV KSGVRLVQGI VKDVQPDKLI LDNGEEVPYG LLVWSTGVGA SSFVKSLPFP KSAGGRIGVD EWLRVPSVPD VFAVGDCCGF
401: LESTGKEVLP ALAQVAERQG LYLARLLNSV MKAGGGHANS QVEVDLGPKF VYKHLGSMAT VGRYKALVDL RQSKGSKGIS IAGFASWFIW RSAYLTRVVS
501: WRNRLYVAIN WLTTMIFGRD ISRI

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.