Factsheet for GSMUA_Achr11P10760_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70466	Canola	mitochondrion, peroxisome	68.72	79.71
GSMUA_Achr7P00100_001	Banana	mitochondrion	76.6	76.98
HORVU3Hr1G110990.1	Barley	peroxisome	16.5	71.28
VIT_19s0027g01030.t01	Wine grape	cytosol	50.74	69.59
KRH72693	Soybean	mitochondrion	79.31	66.39
EES01700	Sorghum	mitochondrion	81.77	66.0
KRH17048	Soybean	mitochondrion	78.82	65.98
Solyc06g007160.2.1	Tomato	plastid	79.06	64.85
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	25.86	64.81
TraesCS3B01G382500.1	Wheat	mitochondrion	79.56	64.47
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	78.57	64.44
TraesCS3A01G349900.1	Wheat	mitochondrion	79.31	64.27
TraesCS3D01G343900.1	Wheat	mitochondrion	79.06	64.07
VIT_06s0004g06760.t01	Wine grape	plastid	78.57	63.93
KRH30292	Soybean	mitochondrion	80.05	63.85
KRG98274	Soybean	mitochondrion	79.56	63.83
CDX84870	Canola	mitochondrion	79.06	63.69
Bra022768.1-P	Field mustard	mitochondrion	79.06	63.69
Os01t0830100-01	Rice	mitochondrion	71.43	63.6
AT2G29990.1	Thale cress	mitochondrion	79.56	63.58
AT1G07180.1	Thale cress	mitochondrion	79.06	62.94
CDY06685	Canola	mitochondrion	78.82	62.87
Bra015560.1-P	Field mustard	mitochondrion	78.82	62.87
Zm00001d012464_P001	Maize	mitochondrion	81.28	62.86
CDY10256	Canola	mitochondrion	78.33	62.48
HORVU3Hr1G087850.7	Barley	peroxisome	79.31	61.45
CDY15606	Canola	plastid	76.35	61.39
Bra030676.1-P	Field mustard	plastid	76.35	61.39
CDX86494	Canola	mitochondrion, peroxisome	75.86	60.87
HORVU2Hr1G022740.3	Barley	extracellular	20.44	60.58
HORVU2Hr1G101830.2	Barley	extracellular	22.66	57.86
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	39.66	57.71
HORVU7Hr1G040660.4	Barley	cytosol	26.85	55.61
GSMUA_Achr5P28430_001	Banana	plastid	77.83	54.86
HORVU5Hr1G020920.4	Barley	extracellular	23.65	54.86
HORVU5Hr1G056500.3	Barley	extracellular	22.66	52.57
GSMUA_Achr3P22940_001	Banana	mitochondrion	37.44	26.25
GSMUA_Achr4P33660_001	Banana	mitochondrion	35.71	25.04
GSMUA_Achr10P...	Banana	mitochondrion	36.45	15.13

Protein Annotations

EnsemblPlants:GSMUA_Achr11P10760_001	EnsemblPlants:GSMUA_Achr11T10760_001	EnsemblPlantsGene:GSMUA_Achr11G10760_001	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:IPR036188	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	PFAM:PF07992	PRINTS:PR00368	SUPFAM:SSF51905
UniParc:UPI0002954C9D	UniProt:M0RR56	MapMan:2.4.2.1.1	:	:	:

Description

Putative Probable NADH dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr11G10760_001]

Coordinates

chr11:-:8525137..8534419

Molecular Weight (calculated)

45049.2 Da

IEP (calculated)

8.212

GRAVY (calculated)

-0.019

Length

406 amino acids

Sequence
(BLAST)

001: MVFTPLLAST CVGTLEFRSV AEPIGRIQPA ISTAPDSYFF LARCTAIDPD AHTVHCESVT DQGGVRDAVE PWKFTVSYDK LVIAAGAEAS TFGINGVKEH
101: AIFLREVHHA QEIRRRLLLN LMLSDVPGIS EDEKKRLLHC VVIGGGPTGV EFSGELSDFI IKDVHERYSH VKDFIHVTLI EANEILSSFD VRLRQYATKQ
201: LTKSGVRLVR GVVKDVQPEK VILNDGTEVP YGLLVWSTGV GPSPFVKSLY FPKSPGGRIG VDDWLRIPSV QDVFAIGDCS GFLETTGKPT LPALAQVAER
301: QGKYLSNLLN QIGKAGGGYR NAAENLELGD PFVYRHLGSM ATVGRYKALV DLRQNKEDKG LSLTGFISWF IWRSAYLTRV ISWRNRFYVA INWLTTFVFG
401: RDISRI

Best Arabidopsis Sequence Match ( AT2G29990.1 )
(BLAST)

001: MFMIKNLTRI SPNTSSIITR FRNSGSSSLS YTLASRFCTA QETQIQSPAK IPNDVDRSQY SGLPPTREGE KPRVVVLGSG WAGCRLMKGI DTNLYDVVCV
101: SPRNHMVFTP LLASTCVGTL EFRSVAEPIS RIQPAISREP GSFFFLANCS RLDADAHEVH CETLTDGLNT LKPWKFKIAY DKLVIASGAE ASTFGIHGVM
201: ENAIFLREVH HAQEIRRKLL LNLMLSDTPG ISKEEKRRLL HCVVVGGGPT GVEFSGELSD FIMKDVRQRY AHVKDDIHVT LIEARDILSS FDDRLRRYAI
301: KQLNKSGVRF VRGIVKDVQS QKLILDDGTE VPYGLLVWST GVGPSPFVRS LGLPKDPTGR IGIDEWMRVP SVQDVFAIGD CSGYLETTGK PTLPALAQVA
401: EREGKYLANL LNAIGKGNGG RANSAKEIEL GVPFVYKHLG SMATIGRYKA LVDLRESKDA KGISMTGFVS WFIWRSAYLT RVISWRNRFY VAINWFTTFV
501: FGRDISRI

Arabidopsis Description

NDA2Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80874]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.