Factsheet for GSMUA_Achr7P00100_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	76.98	76.6
HORVU2Hr1G040130.1	Barley	peroxisome	80.69	65.33
GSMUA_Achr5P28430_001	Banana	plastid	90.84	63.72
VIT_00s0301g00090.t01	Wine grape	mitochondrion	83.91	62.09
KRH41912	Soybean	mitochondrion	82.67	60.73
KRH49960	Soybean	mitochondrion	82.67	60.73
PGSC0003DMT400057603	Potato	mitochondrion	79.95	59.05
Solyc02g078900.2.1	Tomato	plastid	79.95	59.05
TraesCS2D01G212500.1	Wheat	plastid	80.69	58.21
TraesCS2A01G203200.1	Wheat	plastid	80.69	58.21
TraesCS2B01G230300.1	Wheat	plastid	80.69	58.21
Os07t0564500-01	Rice	mitochondrion	79.46	57.12
EER97387	Sorghum	mitochondrion	79.95	57.07
Zm00001d021804_P001	Maize	mitochondrion	70.3	46.94
GSMUA_Achr3P22940_001	Banana	mitochondrion	38.61	26.94
GSMUA_Achr4P33660_001	Banana	mitochondrion	37.13	25.91
GSMUA_Achr10P...	Banana	mitochondrion	36.88	15.24

Protein Annotations

EnsemblPlants:GSMUA_Achr7P00100_001	EnsemblPlants:GSMUA_Achr7T00100_001	EnsemblPlantsGene:GSMUA_Achr7G00100_001	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:IPR036188	PANTHER:PTHR43706	PANTHER:PTHR43706:SF4	PFAM:PF07992	PRINTS:PR00368	SUPFAM:SSF51905
UniParc:UPI0002969F6C	UniProt:M0TDF0	MapMan:2.4.2.1.1	:	:	:

Description

Putative Probable NADH dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr7G00100_001]

Coordinates

chr7:-:89449..92943

Molecular Weight (calculated)

44499.7 Da

IEP (calculated)

8.542

GRAVY (calculated)

-0.004

Length

404 amino acids

Sequence
(BLAST)

001: MVFTPLLAST CVGTLEFRSV AEPVSRIQSA LSGAPNSYFY LASCTGIDTH KHQVCCESVS SAGLPDEPYH FKVAYDKLVI AAGADPLTFN IRGVKEHAMF
101: LREVQHAQEI RRKLLLNLML SEAPGISEEE KKRLLHCVVI GGGPTGVEFS GELSDFIMRD VRQRFSHAKD YIQVTLIEAS EILSSFDVGL RQYATNHLTK
201: SGVRLVRGVV KEVLPEKILL SDGTCVPYGL LVWSTGVGPS EFVKSLDLPK SPGGRIGVDE WLRVPSVEDV FALGDCAGFL EQTGRPVLPA LAQVAEREGK
301: YLANLFNQMG KQNGGRAHCA KDIPLGDPFV YRHLGSLASV GRYKALVDLR QSKDAKGISM AGFVSWFIWR SAYLTRVVSW RNRFYVAVNW ATTLVFGRDN
401: SRIG

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.