Factsheet for Os07t0564500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

mitochondrion: 23257241

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G230300.1	Wheat	plastid	80.25	80.54
TraesCS2A01G203200.1	Wheat	plastid	80.07	80.36
EER97387	Sorghum	mitochondrion	80.61	80.04
TraesCS2D01G212500.1	Wheat	plastid	79.54	79.82
GSMUA_Achr7P00100_001	Banana	mitochondrion	57.12	79.46
HORVU2Hr1G040130.1	Barley	peroxisome	65.84	74.15
KRH41912	Soybean	mitochondrion	66.9	68.36
VIT_00s0301g00090.t01	Wine grape	mitochondrion	66.37	68.31
KRH49960	Soybean	mitochondrion	66.37	67.82
Zm00001d021804_P001	Maize	mitochondrion	72.06	66.94
Solyc02g078900.2.1	Tomato	plastid	64.59	66.36
PGSC0003DMT400057603	Potato	mitochondrion	64.23	66.0
GSMUA_Achr5P28430_001	Banana	plastid	67.08	65.45
Os01t0830100-01	Rice	mitochondrion	51.42	63.38
Os08t0141400-01	Rice	mitochondrion	23.31	36.69
Os06t0684000-02	Rice	mitochondrion	32.03	30.61
Os05t0331200-01	Rice	mitochondrion	30.96	30.26

Protein Annotations

MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EntrezGene:4343616	EMBL:AK121213	ProteinID:BAC15811.1	ProteinID:BAF21917.1
ProteinID:BAT02165.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188	EnsemblPlantsGene:Os07g0564500	EnsemblPlants:Os07t0564500-01
PFAM:PF07992	PANTHER:PTHR43706	PANTHER:PTHR43706:SF4	UniProt:Q8H5X6	SUPFAM:SSF51905	UniParc:UPI00000AD510
RefSeq:XP_015644788.1	SEG:seg	:	:	:	:

Description

Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein. (Os07t0564500-01)

Coordinates

chr7:+:22619086..22621247

Molecular Weight (calculated)

60261.0 Da

IEP (calculated)

9.106

GRAVY (calculated)

-0.030

Length

562 amino acids

Sequence
(BLAST)

001: MAWSRIARGS QLTQPLSRIL AEGNAAATPA AYALRNAAAL GQRASSASAS SSFHSLALAG LADKYAAGAA GRLQPSRGIS TTSPALRPAA EAAARVVECS
101: DAADEAAAAA AVPDLGPTRP GEKPRVVVLG TGWAACRFLK DVDTRAYDVV CISPRNHMVF TPLLASTCVG TLEFRSVVEP VSRIQSALAT RPGSYFFLAS
201: CTGIDTGRHE VHCTAADGDG LPANPYNFKV SYDKLVIASG SEPLTFGIKG VAENAIFLRE VSHAQEIRRK LLTNLMLSEN PGLSEEEKKR LLHCVVVGGG
301: PTGVEFSGEL SDFITRDVRE RYAHVKDYVK VTLIEANEIL SSFDVGLRQY ATDHLSKYGV NLVRGVVKEV KPREIELSDG SRVPYGVLVW STGVGPSEFV
401: RSLPLPKSPG GRIGVDEWLR VPSVEDVFAL GDCAGFLEGT GRAVLPALAQ VAEREGRYLA RVMSRIAAQD GGRAGRAVGS AELGEPFVYK HIGSMASVGR
501: YKALVDLREN KDARGVSMAG FVSWLMWRSA YLTRVVSWRN RFYVAVNWAT TLVFGRDNTR IG

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.