Factsheet for TraesCS2B01G230300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G203200.1	Wheat	plastid	98.21	98.21
TraesCS2D01G212500.1	Wheat	plastid	98.21	98.21
HORVU2Hr1G040130.1	Barley	peroxisome	74.82	83.97
GSMUA_Achr7P00100_001	Banana	mitochondrion	58.21	80.69
Os07t0564500-01	Rice	mitochondrion	80.54	80.25
EER97387	Sorghum	mitochondrion	79.29	78.45
VIT_00s0301g00090.t01	Wine grape	mitochondrion	66.25	67.95
KRH41912	Soybean	mitochondrion	66.43	67.64
KRH49960	Soybean	mitochondrion	66.07	67.27
PGSC0003DMT400057603	Potato	mitochondrion	65.0	66.54
Solyc02g078900.2.1	Tomato	plastid	65.0	66.54
GSMUA_Achr5P28430_001	Banana	plastid	67.32	65.45
TraesCS3B01G382500.1	Wheat	mitochondrion	57.68	64.47
Zm00001d021804_P001	Maize	mitochondrion	69.64	64.46
TraesCS7B01G206900.1	Wheat	mitochondrion	32.5	31.6
TraesCS3B01G350200.1	Wheat	mitochondrion	31.43	30.88
TraesCS7B01G348600.1	Wheat	mitochondrion, peroxisome	31.43	30.09
TraesCS3B01G115600.1	Wheat	cytosol, mitochondrion, peroxisome	11.43	28.32
TraesCS3B01G604700.1	Wheat	cytosol, mitochondrion, peroxisome	11.25	28.25

Protein Annotations

EnsemblPlants:TraesCS2B01G230300.1	EnsemblPlantsGene:TraesCS2B01G230300	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:IPR036188
PANTHER:PTHR43706	PANTHER:PTHR43706:SF4	PFAM:PF07992	PRINTS:PR00368	SEG:seg	SUPFAM:SSF51905
MapMan:2.4.2.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:225844286..225846423

Molecular Weight (calculated)

60614.9 Da

IEP (calculated)

9.122

GRAVY (calculated)

-0.062

Length

560 amino acids

Sequence
(BLAST)

001: MAWSRIARSS QLSQSLSRIA SEGGAPTPAA SALRNEAALG PRSRHAASSF HSLACVGLAD KCGAGAAGHL YGPRRGISAT PARLLPAAAE PVAAECSDTE
101: DPAEAMAALP DLGPTGLKNK PRVVVLGSGW AACRFLKDVD TSAYDVVCVS PRNHMVFTPL LASTCVGTLE FRSVVEPVSR IQPALATRPG SYFFLANCTG
201: IDTRKHEVYC TVAAGDEQLP TNPYRFRVAY DKLVIASGAE PLTFNIKGVQ ENAIFLREVN EAQQIRRKLL TNLMLSENPG LSEAEKKRLL HCVVVGGGPT
301: GVEFSGELSD FIMRDVRDRY AHVKDYVKVT LIEANEILSS FDVGLRQYAT NHLSKYGVKL VKGVVKEVLP TEIVLSDGTH VPYGLLVWST GVGPSEFVKS
401: LDLPKSPGGR IGIDEYLRVP SVEDVYALGD CAGFLESTKR PVLPALAQVA EREGKYLAQL FKKLAAQNGG GRAYCGKRAD LGEPFVYKHI GSMASVGRYK
501: ALVDLRENKD AKGVSMAGFL SWVMWRSAYL TRVVSWRNRF YVAVNWATTL VFGRDNTRIG

Best Arabidopsis Sequence Match ( AT1G07180.1 )
(BLAST)

001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI

Arabidopsis Description

NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.