CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0564500-01	Rice	mitochondrion	80.04	80.61
GSMUA_Achr7P00100_001	Banana	mitochondrion	57.07	79.95
TraesCS2B01G230300.1	Wheat	plastid	78.45	79.29
TraesCS2A01G203200.1	Wheat	plastid	78.45	79.29
TraesCS2D01G212500.1	Wheat	plastid	78.09	78.93
Zm00001d021804_P001	Maize	mitochondrion	82.69	77.36
HORVU2Hr1G040130.1	Barley	peroxisome	66.08	74.95
VIT_00s0301g00090.t01	Wine grape	mitochondrion	64.49	66.85
KRH41912	Soybean	mitochondrion	64.84	66.73
GSMUA_Achr5P28430_001	Banana	plastid	67.31	66.15
KRH49960	Soybean	mitochondrion	64.13	66.0
EES01700	Sorghum	mitochondrion	58.13	65.41
Solyc02g078900.2.1	Tomato	plastid	63.07	65.27
PGSC0003DMT400057603	Potato	mitochondrion	62.72	64.9
EES01568	Sorghum	mitochondrion	30.92	30.28
EES14522	Sorghum	mitochondrion	30.92	30.12
EER90248	Sorghum	mitochondrion	29.86	28.94

Protein Annotations

MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EntrezGene:8081758	UniProt:C5XBL6	EnsemblPlants:EER97387	ProteinID:EER97387
ProteinID:EER97387.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188	ProteinID:KXG36487.2	PFAM:PF07992
PANTHER:PTHR43706	PANTHER:PTHR43706:SF4	EnsemblPlantsGene:SORBI_3002G340600	SUPFAM:SSF51905	UniParc:UPI0001A836C5	RefSeq:XP_002460866.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:70759945..70763724

Molecular Weight (calculated)

60774.9 Da

IEP (calculated)

9.543

GRAVY (calculated)

-0.071

Length

566 amino acids

Sequence
(BLAST)

001: MAAAWSRIGR GAQLSLSQSL SRTLYEGGVG GATPAEAASA LRSAAALSRA RGQHVSSLHS LVGRSAGGGH LLQPPSRGIV TTPARLHPAS SAAVAAELSD
101: AETREHDPVT APPRQTPGLG PTRPGEKPRV VVLGTGWAAC RLLKDVDTSA YDVVCVSPRN HMVFTPLLAS TCVGTLEFRS VVEPVSRIQS ALATRPGSYF
201: FLASCTGVDT KAHEVYCTAA SVDAQLPSDP YQFKIAYDKL VIASGAEPLT FNIKGVQENA IFLREVSHAQ EIRRKLLTNL MLAENPGLSD EEKKRLLHCV
301: VVGGGPTGVE FSGELSDFIT RDVRQRYAHV KDYVKVTLIE ANEILSSFDI GLRQYATNHL SKYGVNLVRG IVKEVKPTEI TLSDGTRVPY GLLVWSTGVG
401: PSEFVKSLDL PKSPGGRIGV DEWLRVPTAP DVFALGDCAG FLEGTGKPVL PALAQVAERE GRYLARLLGK VAAQNGGKAH CAGKADLGEP FVYKHIGSMA
501: SVGRYKALVD LRENKDAKGV SMAGFLSWLM WRSAYLTRVV SWRNRFYVAV NWGTTLVFGR DNTRIG

Best Arabidopsis Sequence Match ( AT2G29990.1 )
(BLAST)

001: MFMIKNLTRI SPNTSSIITR FRNSGSSSLS YTLASRFCTA QETQIQSPAK IPNDVDRSQY SGLPPTREGE KPRVVVLGSG WAGCRLMKGI DTNLYDVVCV
101: SPRNHMVFTP LLASTCVGTL EFRSVAEPIS RIQPAISREP GSFFFLANCS RLDADAHEVH CETLTDGLNT LKPWKFKIAY DKLVIASGAE ASTFGIHGVM
201: ENAIFLREVH HAQEIRRKLL LNLMLSDTPG ISKEEKRRLL HCVVVGGGPT GVEFSGELSD FIMKDVRQRY AHVKDDIHVT LIEARDILSS FDDRLRRYAI
301: KQLNKSGVRF VRGIVKDVQS QKLILDDGTE VPYGLLVWST GVGPSPFVRS LGLPKDPTGR IGIDEWMRVP SVQDVFAIGD CSGYLETTGK PTLPALAQVA
401: EREGKYLANL LNAIGKGNGG RANSAKEIEL GVPFVYKHLG SMATIGRYKA LVDLRESKDA KGISMTGFVS WFIWRSAYLT RVISWRNRFY VAINWFTTFV
501: FGRDISRI

Arabidopsis Description

NDA2Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80874]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.