Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G203200.1 | Wheat | plastid | 98.93 | 98.93 |
| TraesCS2B01G230300.1 | Wheat | plastid | 98.21 | 98.21 |
| HORVU2Hr1G040130.1 | Barley | peroxisome | 74.46 | 83.57 |
| GSMUA_Achr7P00100_001 | Banana | mitochondrion | 58.21 | 80.69 |
| Os07t0564500-01 | Rice | mitochondrion | 79.82 | 79.54 |
| EER97387 | Sorghum | mitochondrion | 78.93 | 78.09 |
| VIT_00s0301g00090.t01 | Wine grape | mitochondrion | 66.07 | 67.77 |
| KRH41912 | Soybean | mitochondrion | 66.07 | 67.27 |
| KRH49960 | Soybean | mitochondrion | 65.71 | 66.91 |
| PGSC0003DMT400057603 | Potato | mitochondrion | 65.18 | 66.73 |
| Solyc02g078900.2.1 | Tomato | plastid | 65.18 | 66.73 |
| GSMUA_Achr5P28430_001 | Banana | plastid | 67.5 | 65.62 |
| TraesCS3D01G343900.1 | Wheat | mitochondrion | 57.5 | 64.27 |
| Zm00001d021804_P001 | Maize | mitochondrion | 68.93 | 63.8 |
| TraesCS7D01G303500.1 | Wheat | golgi | 32.32 | 31.42 |
| TraesCS3D01G314700.1 | Wheat | mitochondrion | 31.25 | 30.54 |
| TraesCS7D01G438100.1 | Wheat | peroxisome, plastid | 31.25 | 28.23 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G212500.1 | EnsemblPlantsGene:TraesCS2D01G212500 | Gene3D:3.50.50.100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom | InterPro:IPR036188 |
| PANTHER:PTHR43706 | PANTHER:PTHR43706:SF4 | PFAM:PF07992 | SEG:seg | SUPFAM:SSF51905 | MapMan:2.4.2.1.1 |
Description
No Description!
Coordinates
chr2D:+:170778863..170780994
Molecular Weight (calculated)
60577.8 Da
IEP (calculated)
9.132
GRAVY (calculated)
-0.058
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWSRIARSS QLSQSLSRIA SEGGAPTPAA SALRNAAALG PRSRHAASSF HSLACVGLAD KCGAGAGGHL YGQNRGISAT PSRLLPAAAE PLAAECSDTE
101: DPAEAMAALP DLGPTGLKNK PRVVVLGSGW AACRFLKDVD TSVYDVVCVS PRNHMVFTPL LASTCVGTLE FRSVVEPVSR IQPALATRPG SYFFLANCTG
201: IDTRKHEVYC TVAAGDEQLP TNPYRFRVAY DKLVIASGAE PLTFNIKGVQ DNAIFLREVN EAQQIRRKLL TNLMLSENPG LSEAEKKRLL HCVVVGGGPT
301: GVEFSGELSD FIMRDVRDRY AHVKDYVKVT LIEANEILSS FDVGLRQYAT NHLSKYGVKL VKGVVKEVLP TEIVLSDGTH VPYGLLVWST GVGPSEFVKS
401: LDLPKSPGGR IGIDEYLRVP SVEDVYALGD CAGFLESTKR PVLPALAQVA EREGKYLAQL FKKLAAQNGG GRAHCGKRVD LGEPFVYKHI GSMASVGRYK
501: ALVDLRENKD AKGVSMAGFL SWVMWRSAYL TRVVSWRNRF YVAVNWATTL VFGRDNTRIG
101: DPAEAMAALP DLGPTGLKNK PRVVVLGSGW AACRFLKDVD TSVYDVVCVS PRNHMVFTPL LASTCVGTLE FRSVVEPVSR IQPALATRPG SYFFLANCTG
201: IDTRKHEVYC TVAAGDEQLP TNPYRFRVAY DKLVIASGAE PLTFNIKGVQ DNAIFLREVN EAQQIRRKLL TNLMLSENPG LSEAEKKRLL HCVVVGGGPT
301: GVEFSGELSD FIMRDVRDRY AHVKDYVKVT LIEANEILSS FDVGLRQYAT NHLSKYGVKL VKGVVKEVLP TEIVLSDGTH VPYGLLVWST GVGPSEFVKS
401: LDLPKSPGGR IGIDEYLRVP SVEDVYALGD CAGFLESTKR PVLPALAQVA EREGKYLAQL FKKLAAQNGG GRAHCGKRVD LGEPFVYKHI GSMASVGRYK
501: ALVDLRENKD AKGVSMAGFL SWVMWRSAYL TRVVSWRNRF YVAVNWATTL VFGRDNTRIG
001: MLWIKNLARI SQTTSSSVGN VFRNPESYTL SSRFCTALQK QQVTDTVQAK EDVVNALEPQ RYDGLAPTKE GEKPRVLVLG SGWAGCRVLK GIDTSIYDVV
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI
101: CVSPRNHMVF TPLLASTCVG TLEFRSVAEP ISRIQPAISR EPGSYYFLAN CSKLDADNHE VHCETVTEGS STLKPWKFKI AYDKLVLACG AEASTFGING
201: VLENAIFLRE VHHAQEIRRK LLLNLMLSEV PGIGEDEKKR LLHCVVVGGG PTGVEFSGEL SDFIMKDVRQ RYSHVKDDIR VTLIEARDIL SSFDDRLRHY
301: AIKQLNKSGV KLVRGIVKEV KPQKLILDDG TEVPYGPLVW STGVGPSSFV RSLDFPKDPG GRIGIDEWMR VPSVQDVFAI GDCSGYLEST GKSTLPALAQ
401: VAEREGKYLA NLFNVMGKAG GGRANSAKEM ELGEPFVYKH LGSMATIGRY KALVDLRESK EGKGISMAGF LSWFIWRSAY LTRVVSWRNR FYVAINWLTT
501: FVFGRDISRI
Arabidopsis Description
NDA1Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.