Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G448800.2 | Wheat | mitochondrion, peroxisome | 93.55 | 98.81 |
| TraesCS7B01G348600.1 | Wheat | mitochondrion, peroxisome | 93.06 | 98.63 |
| HORVU7Hr1G101500.4 | Barley | endoplasmic reticulum | 87.26 | 92.32 |
| KRH22445 | Soybean | peroxisome | 7.26 | 88.24 |
| Os06t0684000-02 | Rice | mitochondrion | 80.48 | 84.86 |
| EER90248 | Sorghum | mitochondrion | 79.68 | 84.59 |
| Zm00001d036557_P002 | Maize | mitochondrion | 79.19 | 79.84 |
| TraesCS7D01G303500.1 | Wheat | golgi | 63.71 | 68.58 |
| Zm00001d037405_P001 | Maize | endoplasmic reticulum, extracellular | 17.9 | 66.87 |
| TraesCS3D01G314700.1 | Wheat | mitochondrion | 59.19 | 64.05 |
| TraesCS3D01G343900.1 | Wheat | mitochondrion | 27.9 | 34.53 |
| TraesCS2D01G212500.1 | Wheat | plastid | 28.23 | 31.25 |
Protein Annotations
| MapMan:2.4.2.1.2 | Gene3D:3.50.50.100 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD/NAD-bd_sf |
| InterPro:FAD/NAD-binding_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR002048 | InterPro:IPR036188 | PFAM:PF07992 |
| PRINTS:PR00368 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR43706 | PANTHER:PTHR43706:SF3 | SUPFAM:SSF47473 |
| SUPFAM:SSF51905 | EnsemblPlantsGene:TraesCS7D01G438100 | EnsemblPlants:TraesCS7D01G438100.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7D:+:557403460..557408375
Molecular Weight (calculated)
68709.3 Da
IEP (calculated)
8.023
GRAVY (calculated)
-0.209
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRPVSIAIA QRPGKEQSSE AEPRGPGQLR KSRMGFSFFA SRAAARFLQD IRRPSSAGVS TAALLLTAAS GGGIVAYADS ARAEEAPEPP PRKKKVVVLG
101: TGWAGTSFLK NLDSSRYEVK VISPRNYFAF TPLLPSVTCG TVEARSVVEP IRRMFEKKGK DVAYYEAECF KIDPTKKAVH CRSAVGTNLD GNGDFMLDYD
201: YLVVALGATV NTFNTPGVME HCHFLKEVED AQKIRKSVID CFERASIPNI SEEEKRKILH FVIIGGGPTG VEFAAELHDF LVEDLVKLYP AIAQFVKITI
301: IQSGEHILNT FDQRIAVFAE SKFQRDGIEL STGFRVIKVS DDSITVKCKS SGVETLVPYG MAIWSAGIGT RPVITDFMNQ VGQGKRRALA TNEWLRVPEC
401: DSVYAIGDCS SISQRKIMED ISTIFKVADK DNSGTLTLKE INDVLEDICI RYPQVELYMK SMHMVDIADL IKGGVGDSNK ESMVVNIEEF KKALCHVDSQ
501: VKTVPATAQV AAQQGYYLAD CFNKKDHCVE HPEGPLRLTG SGEGHHNFRP FRYKHLGQFA PLGGEQAAAE LPGDWVSMGH STQWLWYSVY ASKQVSWRTR
601: VLVVSDWTRR FIFGRDSSRI
101: TGWAGTSFLK NLDSSRYEVK VISPRNYFAF TPLLPSVTCG TVEARSVVEP IRRMFEKKGK DVAYYEAECF KIDPTKKAVH CRSAVGTNLD GNGDFMLDYD
201: YLVVALGATV NTFNTPGVME HCHFLKEVED AQKIRKSVID CFERASIPNI SEEEKRKILH FVIIGGGPTG VEFAAELHDF LVEDLVKLYP AIAQFVKITI
301: IQSGEHILNT FDQRIAVFAE SKFQRDGIEL STGFRVIKVS DDSITVKCKS SGVETLVPYG MAIWSAGIGT RPVITDFMNQ VGQGKRRALA TNEWLRVPEC
401: DSVYAIGDCS SISQRKIMED ISTIFKVADK DNSGTLTLKE INDVLEDICI RYPQVELYMK SMHMVDIADL IKGGVGDSNK ESMVVNIEEF KKALCHVDSQ
501: VKTVPATAQV AAQQGYYLAD CFNKKDHCVE HPEGPLRLTG SGEGHHNFRP FRYKHLGQFA PLGGEQAAAE LPGDWVSMGH STQWLWYSVY ASKQVSWRTR
601: VLVVSDWTRR FIFGRDSSRI
001: MTLLSSLGRA SRSAPLASKL LLLGTLSGGS IVAYADANEE ANKKEEHKKK KVVVLGTGWA GISFLKDLDI TSYDVQVVSP QNYFAFTPLL PSVTCGTVEA
101: RSIVESVRNI TKKKNGEIEL WEADCFKIDH VNQKVHCRPV FKDDPEASQE FSLGYDYLIV AVGAQVNTFG TPGVLENCHF LKEVEDAQRI RRGVIDCFEK
201: AILPGLTEEQ RRRKLHFVIV GGGPTGVEFA AELHDFIIED ITKIYPSVKE LVKITLIQSG DHILNTFDER ISSFAEQKFT RDGIDVQTGM RVMSVTDKDI
301: TVKVKSSGEL VSIPHGLILW STGVGTRPVI SDFMEQVGQG GRRAVATNEW LQVTGCENVY AVGDCASIAQ RKILGDIANI FKAADADNSG TLTMEELEGV
401: VDDIIVRYPQ VELYLKSKHM RHINDLLADS EGNARKEVDI EAFKLALSEA DSQMKTLPAT AQVAAQQGAY LAKCFNRMEQ CKELPEGPKR FRTGGHHQFR
501: PFQYKHFGQF APLGGDQAAA ELPGDWVSAG KSAQWLWYSV YASKQVSWRT RALVVSDWTR RYIFGRDSSR I
101: RSIVESVRNI TKKKNGEIEL WEADCFKIDH VNQKVHCRPV FKDDPEASQE FSLGYDYLIV AVGAQVNTFG TPGVLENCHF LKEVEDAQRI RRGVIDCFEK
201: AILPGLTEEQ RRRKLHFVIV GGGPTGVEFA AELHDFIIED ITKIYPSVKE LVKITLIQSG DHILNTFDER ISSFAEQKFT RDGIDVQTGM RVMSVTDKDI
301: TVKVKSSGEL VSIPHGLILW STGVGTRPVI SDFMEQVGQG GRRAVATNEW LQVTGCENVY AVGDCASIAQ RKILGDIANI FKAADADNSG TLTMEELEGV
401: VDDIIVRYPQ VELYLKSKHM RHINDLLADS EGNARKEVDI EAFKLALSEA DSQMKTLPAT AQVAAQQGAY LAKCFNRMEQ CKELPEGPKR FRTGGHHQFR
501: PFQYKHFGQF APLGGDQAAA ELPGDWVSAG KSAQWLWYSV YASKQVSWRT RALVVSDWTR RYIFGRDSSR I
Arabidopsis Description
NDB1External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q1JPL4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.