Factsheet for TraesCS7D01G303500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G206900.1	Wheat	mitochondrion	99.48	99.48
TraesCS7A01G306600.1	Wheat	mitochondrion	99.48	99.48
HORVU7Hr1G073050.3	Barley	plastid	98.78	92.82
Os08t0141400-01	Rice	mitochondrion	54.34	87.68
EES14522	Sorghum	mitochondrion	87.85	87.09
Zm00001d049597_P001	Maize	mitochondrion	88.19	85.81
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	28.65	71.74
TraesCS3D01G314700.1	Wheat	mitochondrion	70.49	70.86
KRH49945	Soybean	mitochondrion	69.97	69.48
KRH10751	Soybean	mitochondrion	69.44	69.44
Bra029549.1-P	Field mustard	mitochondrion	69.79	69.43
CDY16620	Canola	mitochondrion	69.79	69.43
KRH41931	Soybean	mitochondrion	69.79	69.31
KRH21576	Soybean	mitochondrion	69.1	69.1
CDY44749	Canola	mitochondrion	69.44	69.08
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	68.75	68.87
PGSC0003DMT400057712	Potato	mitochondrion	69.79	68.84
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	69.1	68.62
Solyc02g079170.2.1	Tomato	nucleus	69.44	68.49
KRH25488	Soybean	peroxisome	48.61	68.46
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	25.17	68.08
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	57.81	66.2
Solyc07g054670.2.1	Tomato	unclear	65.45	65.57
AT4G05020.2	Thale cress	mitochondrion	69.97	65.11
Bra023586.1-P	Field mustard	mitochondrion	63.37	64.72
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	64.58	64.7
CDY38082	Canola	mitochondrion	64.58	64.7
CDX78714	Canola	plastid	64.41	64.63
Bra006374.1-P	Field mustard	plastid	64.24	64.46
CDX70722	Canola	plastid	64.06	64.4
TraesCS7D01G438100.1	Wheat	peroxisome, plastid	68.58	63.71
AT2G20800.1	Thale cress	mitochondrion	64.06	63.4
KRH62788	Soybean	cytosol	17.71	62.96
TraesCS3D01G343900.1	Wheat	mitochondrion	31.08	35.73
TraesCS2D01G212500.1	Wheat	plastid	31.42	32.32

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	SMART:SM00054
SUPFAM:SSF47473	SUPFAM:SSF51905	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G303500	EnsemblPlants:TraesCS7D01G303500.1	:

Description

No Description!

Coordinates

chr7D:+:384938306..384944803

Molecular Weight (calculated)

64674.2 Da

IEP (calculated)

8.185

GRAVY (calculated)

-0.315

Length

576 amino acids

Sequence
(BLAST)

001: MRWTAFAWES ASRAFNNRPT FTGLVVVLAA SSGGGLVAYA DSQPDQPQGF KKKKVVVLGT GWAGTTFLRN LDSKLYDVQV ISPRNYFAFT PLLPSVTCGT
101: VEPRSVVEPI RRILEKKGGD FKFWEAECFK IDPANKKIHC RSNMGTNLDG NGEFLVDYDY LVVAVGARSN TFNTPGVTEN CHFLKEVEDA QKIRRSVMDC
201: FEKASLPYLN EEERKKNLHF VVVGGGPTGV EFAAELHDFV TEDLSKLYPS IQHLVKISLI EAADHILTMF DKRITNFAED KFGRDGIDVK TGYKVVKVSK
301: DAITMQNPAT GDITVPYGMA VWSTGIGTRP FVVDFMKQIG QANRRVLATD EWLRVRECDD VYAVGDCATI NQRRVMEDIS EIFRVADKDK SGTLTVKEIQ
401: DILEDIYVRY PQVKLYMKSK QLNGIADLIR TGKGDTEKES VELSIEEFKK ALSLVDSQVK NLPATAQVAA QQGQYLATCF NKMQTAEENP EGPIRIRGEG
501: RHRFNPFRYR HLGQFAPLGG EQTAAQLPGD WVSIGHSSQW LWYSVYATKQ ISWRTRALVI SDWGRRFIFG RDSSGI

Best Arabidopsis Sequence Match ( AT4G05020.1 )
(BLAST)

001: MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWVSI GHSSQWLWYS VYASKQVSWR TRVLVVSDWM RRFIFGRDSS SI

Arabidopsis Description

NDB2NAD(P)H dehydrogenase B2 [Source:UniProtKB/TrEMBL;Acc:F4JGL5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.