Factsheet for AT2G20800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78714	Canola	plastid	88.32	89.55
CDY38082	Canola	mitochondrion	88.32	89.39
Bra006374.1-P	Field mustard	plastid	87.97	89.2
Bra023586.1-P	Field mustard	mitochondrion	86.43	89.18
CDX70722	Canola	plastid	87.8	89.18
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	87.8	88.87
KRH25488	Soybean	peroxisome	50.0	71.15
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	67.35	68.17
Solyc07g054670.2.1	Tomato	unclear	67.35	68.17
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	58.42	67.59
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	66.49	66.72
GSMUA_Achr4P33660_001	Banana	mitochondrion	64.95	65.28
TraesCS7B01G206900.1	Wheat	mitochondrion	63.57	64.24
TraesCS7D01G303500.1	Wheat	golgi	63.4	64.06
TraesCS7A01G306600.1	Wheat	mitochondrion	63.23	63.89
EES14522	Sorghum	mitochondrion	63.4	63.51
Os05t0331200-01	Rice	mitochondrion	62.71	63.48
Zm00001d049597_P001	Maize	mitochondrion	63.75	62.67
TraesCS3D01G314700.1	Wheat	mitochondrion	61.68	62.65
TraesCS3B01G350200.1	Wheat	mitochondrion	61.34	62.63
TraesCS3A01G316500.1	Wheat	mitochondrion	61.51	62.48
Zm00001d043266_P002	Maize	mitochondrion	62.03	62.46
GSMUA_Achr3P22940_001	Banana	mitochondrion	62.03	62.35
Zm00001d012615_P001	Maize	mitochondrion	61.51	61.94
EES01568	Sorghum	mitochondrion	61.34	61.76
AT4G05020.2	Thale cress	mitochondrion	65.64	61.71
AT4G28220.1	Thale cress	mitochondrion	59.79	60.95
Os08t0141400-01	Rice	mitochondrion	35.91	58.54
GSMUA_Achr10P...	Banana	mitochondrion	61.51	36.61
AT1G07180.1	Thale cress	mitochondrion	30.41	34.71
AT2G29990.1	Thale cress	mitochondrion	28.87	33.07
Zm00001d004457_P001	Maize	mitochondrion	7.9	28.57

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	EntrezGene:816609	ProteinID:AAD20915.1	ProteinID:AEC07074.1	ArrayExpress:AT2G20800
EnsemblPlantsGene:AT2G20800	RefSeq:AT2G20800	TAIR:AT2G20800	RefSeq:AT2G20800-TAIR-G	EnsemblPlants:AT2G20800.1	TAIR:AT2G20800.1
EMBL:DQ446535	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005758	GO:GO:0005777	GO:GO:0008150
GO:GO:0008152	GO:GO:0009536	GO:GO:0016020	GO:GO:0016491	GO:GO:0031314	GO:GO:0046872
GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188	Symbol:NDB4	RefSeq:NP_179673.1	PFAM:PF07992
PO:PO:0000005	PO:PO:0005052	PO:PO:0009005	PO:PO:0009025	PO:PO:0009046	PO:PO:0009049
PO:PO:0020030	PRINTS:PR00368	PRINTS:PR00469	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3
InterPro:Pyridine_nuc-diS_OxRdtase_2	UniProt:Q9SKT7	SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI00000A5A7B	SEG:seg

Description

NDB4External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT7]

Coordinates

chr2:-:8953057..8955831

Molecular Weight (calculated)

65375.2 Da

IEP (calculated)

9.318

GRAVY (calculated)

-0.363

Length

582 amino acids

Sequence
(BLAST)

001: MSFHSFYQRA SSLFKAYPST SKILLLSTFS GGGGVLVYSD SNPLKRILHA DATLDSDGNP IRKKKVVVLG SGWSGYSFLS YLNNPNYDVQ VVSPRNFFLF
101: TPLLPSVTNG TVEARSIVEP IRGLMRKKGF EYKEAECVKI DASNKKIHCR SKEGSSLKGT TEFDMDYDIL ILAVGAKPNT FNTPGVEEHA YFLKEAEDAL
201: NIRHSVIDCF ERASLPNLTE EERKKILHFV VVGGGPTGVE FSAELHDFLV QDVAKIYPKV QEFTKITLLE AGDHILNMFD KRITAFAEEK FQRDGIDLKT
301: GSMVVGVTAD EISTKERETG KIVSEPYGMV VWSTGIGSRP VIKDFMQQIG QGQRRVLATD EWLRVEGCDG VYALGDTATI NQRRVMEDIA AIFNKADKGN
401: TGTLKKKDFN SVVKDICQRY PQVELYLKKN KLKNIANLLK SANGEDTQVN IEKFKQALSE VDSQMKNLPA TAQVASQQGK YLAKCFNKME KCEKKPEGPL
501: RFRGEGRHRF QPFRYRHFGS FAPLGGEQTA AELPGDWVSI GHSSQWLWYS VYASKLVSWR TRMLVISDWT RRFVFGRDSS SI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.