Factsheet for Os05t0331200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

mitochondrion: 23257241
peroxisome: 23257241

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G350200.1	Wheat	mitochondrion	88.35	89.12
TraesCS3A01G316500.1	Wheat	mitochondrion	88.35	88.66
TraesCS3D01G314700.1	Wheat	mitochondrion	87.83	88.13
EES01568	Sorghum	mitochondrion	87.13	86.68
Zm00001d043266_P002	Maize	mitochondrion	86.96	86.51
Zm00001d012615_P001	Maize	mitochondrion	86.61	86.16
HORVU3Hr1G076920.2	Barley	mitochondrion	89.22	83.96
GSMUA_Achr4P33660_001	Banana	mitochondrion	74.96	74.44
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	28.17	70.43
KRH25488	Soybean	peroxisome	48.87	68.7
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	68.0	68.0
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	58.43	66.8
KRH21576	Soybean	mitochondrion	66.43	66.32
KRH10751	Soybean	mitochondrion	66.26	66.15
KRH41931	Soybean	mitochondrion	66.61	66.03
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.35	65.73
PGSC0003DMT400057712	Potato	mitochondrion	66.61	65.58
Solyc07g054670.2.1	Tomato	unclear	65.57	65.57
KRH49945	Soybean	mitochondrion	66.09	65.52
Solyc02g079170.2.1	Tomato	nucleus	66.43	65.41
Os08t0141400-01	Rice	mitochondrion	40.17	64.71
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	65.22	64.66
CDY16620	Canola	mitochondrion	64.35	63.9
Bra029549.1-P	Field mustard	mitochondrion	64.35	63.9
CDX78714	Canola	plastid	63.65	63.76
CDX70722	Canola	plastid	63.48	63.7
Os06t0684000-02	Rice	mitochondrion	65.04	63.61
Bra006374.1-P	Field mustard	plastid	63.48	63.59
CDY44749	Canola	mitochondrion	64.0	63.56
CDY38082	Canola	mitochondrion	63.48	63.48
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	63.48	63.48
Bra023586.1-P	Field mustard	mitochondrion	62.09	63.3
AT2G20800.1	Thale cress	mitochondrion	63.48	62.71
KRH62788	Soybean	cytosol	17.39	61.73
AT4G05020.2	Thale cress	mitochondrion	64.52	59.94
Os01t0830100-01	Rice	mitochondrion	26.78	33.77
Os07t0564500-01	Rice	mitochondrion	30.26	30.96

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	EntrezGene:4338442	ProteinID:AAV43826.1	ProteinID:AAV43902.1	EMBL:AK100884
ProteinID:BAF17134.1	ProteinID:BAS93425.1	ncoils:Coil	ProteinID:EEE63279.1	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188
EnsemblPlantsGene:Os05g0331200	EnsemblPlants:Os05t0331200-01	PFAM:PF07992	PRINTS:PR00368	PFscan:PS50222	PANTHER:PTHR43706
PANTHER:PTHR43706:SF3	UniProt:Q5W745	SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI0000454895	RefSeq:XP_015637913.1

Description

Similar to External rotenone-insensitive NADPH dehydrogenase. (Os05t0331200-01)

Coordinates

chr5:-:15482327..15488104

Molecular Weight (calculated)

64805.6 Da

IEP (calculated)

9.359

GRAVY (calculated)

-0.344

Length

575 amino acids

Sequence
(BLAST)

001: MSASGGLSLV RRAVEAARRT PRWQKRLLVL TAGVGSLTYA CQDNQVLQIN DGTGKKRVVI VGTGWAGASF LRNIDTSLYD VHVVSPRNYF TFTPLLPSVT
101: CGTVEARSIV EPIRNIVRKR GGAFRFWEAE CYKIDPTNKK IHCRSDSDGN SEFVVDYDYL VVSVGARPNT FNTPGVVENC HFLKEVEDAQ KIRKSVLKCF
201: ERASLPNLTE EERKKNLHFV VIGGGPTGVE FAAELHDFVN EDLAKLYPDV KKYANISVIE AGDHILTMFD KRITQFAEDK FKRTGIDLKT NFKVVKVSDK
301: AITMTNSATG EIAVPYGMAV WSTGIGTRPL IMDFMKQVGQ ANRRVLATDE WLRVHGCDDV YALGDCATIT QRKVMEDIAS IFRVADKDNS GSLTVKKIKN
401: VLGDIYERYP QVELYLKTNQ MKDFHDLLKD SDGNAIKESK ELNIEEFKKA LARVDSQVKM LPATAQVASQ EGAYLANCFN KMKYCEENPE GPLRIRGTGR
501: HRFKPFRYRH LGQFAPLGGE QTAAQLPGDW IHVGHSTQWL WYSVYASKQF SWRTRMLVVS DWGRRFIYGR DSSSL

Best Arabidopsis Sequence Match ( AT4G21490.1 )
(BLAST)

001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI

Arabidopsis Description

NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.