CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012615_P001	Maize	mitochondrion	95.67	95.67
Zm00001d043266_P002	Maize	mitochondrion	94.98	94.98
TraesCS3D01G314700.1	Wheat	mitochondrion	86.51	87.26
Os05t0331200-01	Rice	mitochondrion	86.68	87.13
TraesCS3A01G316500.1	Wheat	mitochondrion	86.16	86.91
TraesCS3B01G350200.1	Wheat	mitochondrion	85.47	86.67
HORVU3Hr1G076920.2	Barley	mitochondrion	86.51	81.83
GSMUA_Achr4P33660_001	Banana	mitochondrion	72.32	72.19
EES14522	Sorghum	mitochondrion	70.76	70.4
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	27.85	70.0
KRH25488	Soybean	peroxisome	48.96	69.19
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	67.65	68.0
KRH41931	Soybean	mitochondrion	66.61	66.38
KRH49945	Soybean	mitochondrion	66.44	66.21
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	66.26	66.03
CDY16620	Canola	mitochondrion	66.09	65.98
Bra029549.1-P	Field mustard	mitochondrion	66.09	65.98
KRH10751	Soybean	mitochondrion	65.74	65.97
KRH21576	Soybean	mitochondrion	65.74	65.97
PGSC0003DMT400057712	Potato	mitochondrion	66.44	65.75
CDY44749	Canola	mitochondrion	65.74	65.63
Solyc02g079170.2.1	Tomato	nucleus	66.26	65.58
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	56.92	65.41
Solyc07g054670.2.1	Tomato	unclear	64.71	65.04
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	23.53	63.85
EER90248	Sorghum	mitochondrion	63.32	62.67
CDY38082	Canola	mitochondrion	61.94	62.26
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	61.94	62.26
Bra023586.1-P	Field mustard	mitochondrion	60.55	62.06
CDX78714	Canola	plastid	61.59	62.02
AT4G05020.2	Thale cress	mitochondrion	66.26	61.87
Bra006374.1-P	Field mustard	plastid	61.42	61.85
CDX70722	Canola	plastid	61.25	61.78
AT2G20800.1	Thale cress	mitochondrion	61.76	61.34
KRH62788	Soybean	cytosol	16.78	59.88
EES01700	Sorghum	mitochondrion	28.89	33.2
EER97387	Sorghum	mitochondrion	30.28	30.92

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	EntrezGene:8082358	UniProt:C5XLQ3	EnsemblPlants:EES01568	ProteinID:EES01568
ProteinID:EES01568.1	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PFscan:PS50222
PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	EnsemblPlantsGene:SORBI_3003G317600	SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI0001A84406
RefSeq:XP_002456448.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:64522816..64529495

Molecular Weight (calculated)

65235.3 Da

IEP (calculated)

9.210

GRAVY (calculated)

-0.317

Length

578 amino acids

Sequence
(BLAST)

001: MASNGLSLVR RAAEAVRRTP RWKKGLVFFA VGASTLTFAC QDNRVLQICD GTGNKKKVVI LGTGWAGASF LRNIDTSLYE VHVVSPRNYF TFTPLLPNVT
101: CGTVEARSIV EPIRNIVRKR NGAFRFWEAE CFKIDPANKK VHCRSDVGTN INGNGEFVVD YDYLIVSVGA RPNTFNTPGV TENCHFLKEV EDAQKIRKSV
201: MKCFERAALP NLSEEERKKN LHFVVIGGGP TGVEFAAELH DFVNEDLAKL YPDVKKYVNI SVIEAGGHIL TMFDKRITQF AEEKFKRDGI DLKTNFKVVK
301: VSDNDITMTN TATGEVTVPY GMAVWSTGIG TRPIIMDFMK QVGQGNRRVL ATDEWLRVQG CEDVYALGDC ATIAQRKVME DVAAIFRVAD KDNSGTLTVK
401: KIKDVLGDIY ERYPQVELYL KSNQMKGFHD LLKDSDGSSK ELKELDIEQF KKALAQVDSQ VKMLPATAQV ALQEGRYLAD CFNRMKTCEE YPEGPIRIRG
501: TGRHRFKPFR YRHLGQFAPL GGEQTAYQLP GDWVHVGHST QWLWYSVYAS KQFSWRTRML VVSDWGKRFI FGRDSSSI

Best Arabidopsis Sequence Match ( AT4G21490.1 )
(BLAST)

001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI

Arabidopsis Description

NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.