Factsheet for Zm00001d012615_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01568	Sorghum	mitochondrion	95.67	95.67
Zm00001d043266_P002	Maize	mitochondrion	95.16	95.16
TraesCS3D01G314700.1	Wheat	mitochondrion	86.51	87.26
TraesCS3A01G316500.1	Wheat	mitochondrion	86.16	86.91
TraesCS3B01G350200.1	Wheat	mitochondrion	85.64	86.84
Os05t0331200-01	Rice	mitochondrion	86.16	86.61
HORVU3Hr1G076920.2	Barley	mitochondrion	86.68	82.0
GSMUA_Achr4P33660_001	Banana	mitochondrion	73.01	72.88
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	28.03	70.43
KRH25488	Soybean	peroxisome	48.44	68.46
Zm00001d049597_P001	Maize	mitochondrion	70.07	68.41
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	67.47	67.83
KRH41931	Soybean	mitochondrion	67.47	67.24
KRH49945	Soybean	mitochondrion	66.95	66.72
KRH10751	Soybean	mitochondrion	66.44	66.67
KRH21576	Soybean	mitochondrion	66.44	66.67
PGSC0003DMT400057712	Potato	mitochondrion	67.13	66.44
Solyc02g079170.2.1	Tomato	nucleus	66.95	66.27
CDY16620	Canola	mitochondrion	66.09	65.98
Bra029549.1-P	Field mustard	mitochondrion	66.09	65.98
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	66.09	65.86
CDY44749	Canola	mitochondrion	65.74	65.63
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	57.09	65.61
Solyc07g054670.2.1	Tomato	unclear	64.53	64.87
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	23.7	64.32
CDY38082	Canola	mitochondrion	62.11	62.43
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	62.11	62.43
Bra023586.1-P	Field mustard	mitochondrion	60.73	62.23
CDX78714	Canola	plastid	61.76	62.2
Bra006374.1-P	Field mustard	plastid	61.59	62.02
CDX70722	Canola	plastid	61.42	61.95
AT4G05020.2	Thale cress	mitochondrion	66.26	61.87
AT2G20800.1	Thale cress	mitochondrion	61.94	61.51
KRH62788	Soybean	cytosol	16.95	60.49
Zm00001d036557_P002	Maize	mitochondrion	63.84	60.0
Zm00001d037405_P001	Maize	endoplasmic reticulum, extracellular	15.22	53.01
Zm00001d012464_P001	Maize	mitochondrion	29.41	32.38
Zm00001d004457_P001	Maize	mitochondrion	7.79	27.95
Zm00001d021804_P001	Maize	mitochondrion	28.03	26.78

Protein Annotations

EntrezGene:103636591	MapMan:2.4.2.1.2	Gene3D:3.50.50.100	ProteinID:AQK99956.1	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188
UniProt:K7VC17	PFAM:PF07992	PRINTS:PR00368	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3
SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI0002218B7A	EnsemblPlantsGene:Zm00001d012615	EnsemblPlants:Zm00001d012615_P001	EnsemblPlants:Zm00001d012615_T001
SEG:seg	:	:	:	:	:

Description

External alternative NAD(P)H-ubiquinone oxidoreductase B4 mitochondrial

Coordinates

chr8:-:177260647..177274310

Molecular Weight (calculated)

65329.5 Da

IEP (calculated)

9.393

GRAVY (calculated)

-0.306

Length

578 amino acids

Sequence
(BLAST)

001: MASNGSSLVR RAAAAVRRMP RWKKRLVFFA VGASTLTYAC QDNRVLQICD VTGNKKKVVI LGTGWAGASF LRNIDTSLYD VHVVSPRNYF TFTPLLPSVT
101: CGTVEARSIV EPIRNIVRKR NGAFRFWEAE CFKIDPTNKK VHCRSDVGTN INGNGEFVVD YDYLIVSVGA RPNTFNTPGV TENCHFLKEV EDAQKIRKSV
201: MKCFERAALP NLSEEERKKN LHFVIIGGGP TGVEFAAELH DFVNEDLAKL YPDVKKHVNI SVIEAGGHIL TMFDKRITQF AEEKFKRDGI DLKTNFKVVK
301: VSNKDILMTN PATGEVAVPY GMAVWSTGIG TRPIIMDFMK QVGQENRRVL ATDEWLRVQG CEDVYALGDC ATIAQRKVME DVAAIFRVAD KDNSGTLTVK
401: KIKDVLGDIY ERYPQVELYL KSNQMKGFHD LLKDSDGSSK EFKELDIEQF KRALAQVDSQ VKMLPATAQV AAQEGSYLAD CFNRMKMCEE YPEGPIRIRG
501: AGRHRFKPFR YKHLGQFAPL GGEQTAYQLP GDWVHVGHST QWLWYSVYAS KQFSWRTRML VVSDWGRRFI FGRDSSSI

Best Arabidopsis Sequence Match ( AT4G21490.1 )
(BLAST)

001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI

Arabidopsis Description

NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.