Factsheet for Zm00001d004457_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62788	Soybean	cytosol	18.01	17.9
KRH25488	Soybean	peroxisome	28.57	11.25
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	29.19	9.34
KRH21576	Soybean	mitochondrion	30.43	8.51
KRH10751	Soybean	mitochondrion	30.43	8.51
PGSC0003DMT400057712	Potato	mitochondrion	30.43	8.39
Solyc02g079170.2.1	Tomato	nucleus	30.43	8.39
Solyc07g054670.2.1	Tomato	unclear	29.81	8.35
Bra023586.1-P	Field mustard	mitochondrion	29.19	8.33
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	29.81	8.28
KRH41931	Soybean	mitochondrion	29.81	8.28
KRH49945	Soybean	mitochondrion	29.81	8.28
CDX70722	Canola	plastid	29.19	8.2
CDX78714	Canola	plastid	29.19	8.19
Bra006374.1-P	Field mustard	plastid	29.19	8.19
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	29.19	8.17
CDY38082	Canola	mitochondrion	29.19	8.17
Zm00001d043266_P002	Maize	mitochondrion	29.19	8.13
CDY44749	Canola	mitochondrion	29.19	8.12
CDY16620	Canola	mitochondrion	29.19	8.12
Bra029549.1-P	Field mustard	mitochondrion	29.19	8.12
Zm00001d049597_P001	Maize	mitochondrion	29.81	8.11
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	28.57	8.0
AT4G05020.2	Thale cress	mitochondrion	30.43	7.92
AT2G20800.1	Thale cress	mitochondrion	28.57	7.9
Zm00001d012615_P001	Maize	mitochondrion	27.95	7.79
Zm00001d036557_P002	Maize	mitochondrion	27.33	7.15
Zm00001d012464_P001	Maize	mitochondrion	14.29	4.38
Zm00001d021804_P001	Maize	mitochondrion	7.45	1.98
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	1.24	0.94
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	1.24	0.87
Zm00001d037405_P001	Maize	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d004457_P001	EnsemblPlants:Zm00001d004457_T001	EnsemblPlantsGene:Zm00001d004457	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	ProteinID:ONM18929.1
TMHMM:TMhelix	UniParc:UPI0008447943	UniProt:A0A1D6EFG5	MapMan:35.1	:	:

Description

External alternative NAD(P)H-ubiquinone oxidoreductase B3 mitochondrial

Coordinates

chr2:+:113221514..113223309

Molecular Weight (calculated)

18361.6 Da

IEP (calculated)

10.394

GRAVY (calculated)

-0.053

Length

161 amino acids

Sequence
(BLAST)

001: MARRVRCLRY RHLGQFAPLG GKQTAAQLPG DWISIGHSTQ WLWYSVYATR LVRWGGGIKE QNQTLELVIM AWELIEVPGN LNPSLKDSSV DVVAAKIDPK
101: LANTLIRQLS QVCPLENLRH VKRVRRRTEC GGICTFILFF FFCPLRALLL EDMPSLPKST R

Best Arabidopsis Sequence Match ( AT4G05020.1 )
(BLAST)

001: MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWVSI GHSSQWLWYS VYASKQVSWR TRVLVVSDWM RRFIFGRDSS SI

Arabidopsis Description

NDB2NAD(P)H dehydrogenase B2 [Source:UniProtKB/TrEMBL;Acc:F4JGL5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.