CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 1
mitochondrion 3
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	peroxisome
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25488	Soybean	peroxisome	79.52	97.8
KRH22445	Soybean	peroxisome	7.55	74.51
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	76.14	66.61
Solyc07g054670.2.1	Tomato	unclear	72.17	63.13
KRH62788	Soybean	cytosol	19.88	61.73
KRH10751	Soybean	mitochondrion	70.38	61.46
KRH49945	Soybean	mitochondrion	70.78	61.38
KRH41931	Soybean	mitochondrion	70.78	61.38
KRH21576	Soybean	mitochondrion	70.18	61.28
CDY38082	Canola	mitochondrion	67.59	59.13
CDX70722	Canola	plastid	67.2	58.99
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	67.4	58.96
Bra006374.1-P	Field mustard	plastid	67.2	58.88
CDX78714	Canola	plastid	67.0	58.71
Bra023586.1-P	Field mustard	mitochondrion	65.61	58.51
Os05t0331200-01	Rice	mitochondrion	66.8	58.43
AT2G20800.1	Thale cress	mitochondrion	67.59	58.42
TraesCS7A01G306600.1	Wheat	mitochondrion	66.2	57.81
TraesCS7B01G206900.1	Wheat	mitochondrion	66.2	57.81
TraesCS7D01G303500.1	Wheat	golgi	66.2	57.81
TraesCS3B01G350200.1	Wheat	mitochondrion	65.21	57.54
EES14522	Sorghum	mitochondrion	66.4	57.49
GSMUA_Achr3P22940_001	Banana	mitochondrion	66.0	57.34
GSMUA_Achr4P33660_001	Banana	mitochondrion	65.81	57.17
Zm00001d043266_P002	Maize	mitochondrion	65.61	57.09
Zm00001d012615_P001	Maize	mitochondrion	65.61	57.09
TraesCS3A01G316500.1	Wheat	mitochondrion	65.01	57.07
EES01568	Sorghum	mitochondrion	65.41	56.92
TraesCS3D01G314700.1	Wheat	mitochondrion	64.81	56.89
Zm00001d049597_P001	Maize	mitochondrion	66.0	56.08
KRH25490	Soybean	mitochondrion	62.43	54.8
Os08t0141400-01	Rice	mitochondrion	36.38	51.26
KRH56037	Soybean	extracellular, plasma membrane	30.22	45.1
KRH17976	Soybean	cytosol	14.12	36.6
KRH26903	Soybean	mitochondrion	16.9	36.02
GSMUA_Achr10P...	Banana	mitochondrion	65.81	33.84
KRH17048	Soybean	mitochondrion	31.01	32.16
KRH72693	Soybean	mitochondrion	30.62	31.75
KRG98274	Soybean	mitochondrion	30.62	30.43
KRH30292	Soybean	mitochondrion	30.62	30.26
Zm00001d004457_P001	Maize	mitochondrion	9.34	29.19
KRH49960	Soybean	mitochondrion	30.62	28.0
KRH41912	Soybean	mitochondrion	30.42	27.82

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	EMBL:ACUP02004084	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	EnsemblPlantsGene:GLYMA_06G298300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005509	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:I1KF65
InterPro:IPR002048	InterPro:IPR036188	EnsemblPlants:KRH56038	ProteinID:KRH56038	ProteinID:KRH56038.1	PFAM:PF00036
PFAM:PF07992	PRINTS:PR00368	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3
SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI00023C84C3	:	:

Description

hypothetical protein

Coordinates

chr6:+:48719828..48724385

Molecular Weight (calculated)

57013.4 Da

IEP (calculated)

8.324

GRAVY (calculated)

-0.323

Length

503 amino acids

Sequence
(BLAST)

001: MKSNSYDIHV VLPRNYFAFT PLLPSVTCGT VEARSVVEPI RSITRKSGVN IHFSEAECYK IDNKNNKVYC RASKDKKLGG QEDFSIDYDY LVIAMGGRSN
101: TFNTPGVQEH AHFLKEVDEA LKIRHTVVDL FERASLPSLP VEEKKKLLSF VVVGGGPTGV EFAAELHDFV LEDMAKLYPS LKDYVKITLL EAGDHILNMF
201: DKRITEFAEQ KFARDGIDVR LGSMVVKVGE NEITAKERSS GQIVSIPHGM VVWSTGIGAR PEVVEFMKQL GQVNRRALVT DEWLRVEGSD NIYALGDCAT
301: INQRRVMEDI AVIFSKADKN NSGKLDLQEF KEVVGDIIDR YPQVDIYLKK NQMKDMASLL KKSQESNIIV DIEYFKEALS KVDSQMKNLP ATAQVAAQQG
401: VYLANCFNRM EECEKYPEGP LRFRGVGRHR FRPFRYKHLG QFAPLGGEQT AAQLPGDWIS IGQSTQWLWY SVYTSKQVSW RTRFLVVGDW GRRFIFGRDS
501: SKI

Best Arabidopsis Sequence Match ( AT2G20800.1 )
(BLAST)

001: MSFHSFYQRA SSLFKAYPST SKILLLSTFS GGGGVLVYSD SNPLKRILHA DATLDSDGNP IRKKKVVVLG SGWSGYSFLS YLNNPNYDVQ VVSPRNFFLF
101: TPLLPSVTNG TVEARSIVEP IRGLMRKKGF EYKEAECVKI DASNKKIHCR SKEGSSLKGT TEFDMDYDIL ILAVGAKPNT FNTPGVEEHA YFLKEAEDAL
201: NIRHSVIDCF ERASLPNLTE EERKKILHFV VVGGGPTGVE FSAELHDFLV QDVAKIYPKV QEFTKITLLE AGDHILNMFD KRITAFAEEK FQRDGIDLKT
301: GSMVVGVTAD EISTKERETG KIVSEPYGMV VWSTGIGSRP VIKDFMQQIG QGQRRVLATD EWLRVEGCDG VYALGDTATI NQRRVMEDIA AIFNKADKGN
401: TGTLKKKDFN SVVKDICQRY PQVELYLKKN KLKNIANLLK SANGEDTQVN IEKFKQALSE VDSQMKNLPA TAQVASQQGK YLAKCFNKME KCEKKPEGPL
501: RFRGEGRHRF QPFRYRHFGS FAPLGGEQTA AELPGDWVSI GHSSQWLWYS VYASKLVSWR TRMLVISDWT RRFVFGRDSS SI

Arabidopsis Description

NDB4External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.