CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25490	Soybean	mitochondrion	62.29	25.65
VIT_12s0057g00260.t01	Wine grape	mitochondrion, plasma membrane	57.63	23.57
PGSC0003DMT400055796	Potato	mitochondrion	57.2	23.4
Solyc10g008630.2.1	Tomato	mitochondrion	56.78	23.22
Bra024217.1-P	Field mustard	mitochondrion	54.24	22.46
CDY29891	Canola	mitochondrion	54.24	22.46
CDY58724	Canola	mitochondrion	53.81	22.28
KRH49945	Soybean	mitochondrion	54.66	22.24
KRH41931	Soybean	mitochondrion	54.66	22.24
Solyc07g054640.1.1	Tomato	mitochondrion	52.97	21.74
KRH10751	Soybean	mitochondrion	52.97	21.7
KRH21576	Soybean	mitochondrion	52.97	21.7
AT4G28220.1	Thale cress	mitochondrion	52.12	21.54
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	36.02	16.9
KRH72693	Soybean	mitochondrion	31.36	15.26
KRH17048	Soybean	mitochondrion	30.08	14.64
KRG98274	Soybean	mitochondrion	30.93	14.43
KRH30292	Soybean	mitochondrion	30.51	14.15
KRH49960	Soybean	mitochondrion	30.93	13.27
KRH41912	Soybean	mitochondrion	30.51	13.09
KRH17976	Soybean	cytosol	6.78	8.25
KRH22445	Soybean	peroxisome	1.69	7.84
KRH25488	Soybean	peroxisome	13.14	7.58
KRH56037	Soybean	extracellular, plasma membrane	9.32	6.53
KRH62788	Soybean	cytosol	3.39	4.94
PGSC0003DMT400047210	Potato	cytosol	5.93	4.55

Protein Annotations

EMBL:ACUP02007755	EnsemblPlants:KRH26903	EnsemblPlantsGene:GLYMA_12G201300	Gene3D:3.50.50.100	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:IPR036188	PANTHER:PTHR43706	PANTHER:PTHR43706:SF5	PFAM:PF07992	ProteinID:KRH26903	ProteinID:KRH26903.1
SUPFAM:SSF51905	UniParc:UPI0006ED53CE	UniProt:A0A0R0H8E2	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr12:-:36201697..36204445

Molecular Weight (calculated)

26123.9 Da

IEP (calculated)

8.534

GRAVY (calculated)

0.150

Length

236 amino acids

Sequence
(BLAST)

001: MMIASFYAKT FHSFPSCYKL VLLCTLSGGG VGSYSESKSD AKPHVPSIDP NEPKKKKLVV LGTGWAGTSF LKDLHASLYD VQVVSPRNYF AFTPLLPSVT
101: CGTVEARSIV EPRKGEIKFW EAECLKIDSA SKKVLCMSNI DDNLVGNGGF SVDYDYLVVA IGAQVNTFNT TGVMKNCHFL KISRLAHLID ICVIDFCIGC
201: WCIFNSGKKF FQDLICHSLY ARRCLCRINL KTAKCQ

Best Arabidopsis Sequence Match ( AT4G05020.1 )
(BLAST)

001: MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWVSI GHSSQWLWYS VYASKQVSWR TRVLVVSDWM RRFIFGRDSS SI

Arabidopsis Description

NDB2NAD(P)H dehydrogenase B2 [Source:UniProtKB/TrEMBL;Acc:F4JGL5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.