CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72693	Soybean	mitochondrion	96.29	96.29
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	65.98	78.82
VIT_19s0027g01030.t01	Wine grape	cytosol	47.63	78.04
CDY70466	Canola	mitochondrion, peroxisome	56.29	78.0
KRG98274	Soybean	mitochondrion	81.03	77.67
KRH30292	Soybean	mitochondrion	80.21	76.42
VIT_06s0004g06760.t01	Wine grape	plastid	78.35	76.15
Solyc06g007160.2.1	Tomato	plastid	74.64	73.13
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	74.43	72.93
Bra022768.1-P	Field mustard	mitochondrion	75.46	72.62
CDX84870	Canola	mitochondrion	75.46	72.62
AT2G29990.1	Thale cress	mitochondrion	75.05	71.65
AT1G07180.1	Thale cress	mitochondrion	74.23	70.59
CDY10256	Canola	mitochondrion	74.02	70.53
Bra015560.1-P	Field mustard	mitochondrion	73.81	70.33
CDY15606	Canola	plastid	73.2	70.3
CDX86494	Canola	mitochondrion, peroxisome	73.2	70.16
CDY06685	Canola	mitochondrion	73.61	70.14
Bra030676.1-P	Field mustard	plastid	72.99	70.1
KRH49960	Soybean	mitochondrion	69.9	61.64
KRH41912	Soybean	mitochondrion	69.48	61.27
KRH17976	Soybean	cytosol	24.12	60.31
KRH22445	Soybean	peroxisome	3.71	35.29
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	32.16	31.01
KRH26903	Soybean	mitochondrion	14.64	30.08
KRH25490	Soybean	mitochondrion	35.26	29.84
KRH41931	Soybean	mitochondrion	35.46	29.66
KRH49945	Soybean	mitochondrion	35.46	29.66
KRH21576	Soybean	mitochondrion	34.64	29.17
KRH10751	Soybean	mitochondrion	34.43	28.99
KRH25488	Soybean	peroxisome	24.12	28.61
KRH56037	Soybean	extracellular, plasma membrane	14.43	20.77
KRH62788	Soybean	cytosol	5.36	16.05

Protein Annotations

EntrezGene:100794663	MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EMBL:ACUP02009041	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
EnsemblPlantsGene:GLYMA_14G194600	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	UniProt:I1MBC1	InterPro:IPR036188	EnsemblPlants:KRH17048	ProteinID:KRH17048	ProteinID:KRH17048.1
PFAM:PF07992	PRINTS:PR00368	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	SUPFAM:SSF51905	UniParc:UPI000233B29D

Description

hypothetical protein

Coordinates

chr14:-:45965417..45970808

Molecular Weight (calculated)

53815.9 Da

IEP (calculated)

8.786

GRAVY (calculated)

-0.021

Length

485 amino acids

Sequence
(BLAST)

001: MSWFRHLSTK FSAITTTSTH RLSLLPRFST STAPVRHAGL EPTQAHEKPR VVVLGSGWAG CRLMKGLDTQ IYDVVCVSPR NHMVFTPLLA STCVGTLEFR
101: TVAEPIARIQ PAISREPGSY FFLANCTAID ADNHVVHCES VTEGAQAPDP WRFTISYDKL VIALGAQPTT FGIHGVYEHA IFLREVYHAQ EIRRKLLLNL
201: MMSDVPGIEE EEKQRLLHCV VVGGGPTGVE FSGELSDFIV RDVRQRYAHV KDYIHVTLIE ANEILSSFDV RLRQYATNQL TKSGVRLVRG IVKDVEEKKI
301: ILNDGTEVPY GLLVWSTGVG PSAIIQSLDL PKAPGGRIGI DEWLRVPTVE DIFSIGDCSG FVESTGKTPL PALAQVAERQ GKYLAFLLNK IGKANGGRAN
401: SAKDVDFGDQ FVYKHMGSMA SIGSYKALVD LRQSKEGKGL SLAGFVSWFI WRSAYLTRVI SWRNRFYVAI NWATTLVFGR DISRI

Best Arabidopsis Sequence Match ( AT2G29990.1 )
(BLAST)

001: MFMIKNLTRI SPNTSSIITR FRNSGSSSLS YTLASRFCTA QETQIQSPAK IPNDVDRSQY SGLPPTREGE KPRVVVLGSG WAGCRLMKGI DTNLYDVVCV
101: SPRNHMVFTP LLASTCVGTL EFRSVAEPIS RIQPAISREP GSFFFLANCS RLDADAHEVH CETLTDGLNT LKPWKFKIAY DKLVIASGAE ASTFGIHGVM
201: ENAIFLREVH HAQEIRRKLL LNLMLSDTPG ISKEEKRRLL HCVVVGGGPT GVEFSGELSD FIMKDVRQRY AHVKDDIHVT LIEARDILSS FDDRLRRYAI
301: KQLNKSGVRF VRGIVKDVQS QKLILDDGTE VPYGLLVWST GVGPSPFVRS LGLPKDPTGR IGIDEWMRVP SVQDVFAIGD CSGYLETTGK PTLPALAQVA
401: EREGKYLANL LNAIGKGNGG RANSAKEIEL GVPFVYKHLG SMATIGRYKA LVDLRESKDA KGISMTGFVS WFIWRSAYLT RVISWRNRFY VAINWFTTFV
501: FGRDISRI

Arabidopsis Description

NDA2Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80874]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.