Factsheet for Bra022768.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70466	Canola	mitochondrion, peroxisome	69.05	99.43
CDX84870	Canola	mitochondrion	99.4	99.4
AT2G29990.1	Thale cress	mitochondrion	91.67	90.94
Bra030676.1-P	Field mustard	plastid	84.52	84.36
Bra015560.1-P	Field mustard	mitochondrion	84.72	83.89
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	63.69	79.06
KRH17048	Soybean	mitochondrion	72.62	75.46
KRH72693	Soybean	mitochondrion	72.42	75.26
VIT_19s0027g01030.t01	Wine grape	cytosol	44.05	75.0
HORVU3Hr1G110990.1	Barley	peroxisome	13.89	74.47
KRH30292	Soybean	mitochondrion	74.01	73.28
KRG98274	Soybean	mitochondrion	73.41	73.12
VIT_06s0004g06760.t01	Wine grape	plastid	71.63	72.34
Solyc06g007160.2.1	Tomato	plastid	70.83	72.12
PGSC0003DMT400010678	Potato	mitochondrion, peroxisome, plastid	70.63	71.92
EES01700	Sorghum	mitochondrion	71.23	71.37
TraesCS3D01G343900.1	Wheat	mitochondrion	70.24	70.66
TraesCS3B01G382500.1	Wheat	mitochondrion	70.24	70.66
TraesCS3A01G349900.1	Wheat	mitochondrion	69.84	70.26
Os01t0830100-01	Rice	mitochondrion	63.1	69.74
Zm00001d012464_P001	Maize	mitochondrion	70.24	67.43
HORVU3Hr1G087950.4	Barley	endoplasmic reticulum, vacuole	21.43	66.67
HORVU3Hr1G087850.7	Barley	peroxisome	68.65	66.03
HORVU2Hr1G022740.3	Barley	extracellular	17.26	63.5
HORVU2Hr1G101830.2	Barley	extracellular	19.05	60.38
HORVU7Hr1G076330.1	Barley	mitochondrion, peroxisome	32.34	58.42
HORVU5Hr1G020920.4	Barley	extracellular	19.84	57.14
HORVU7Hr1G040660.4	Barley	cytosol	22.02	56.63
HORVU5Hr1G056500.3	Barley	extracellular	19.25	55.43
Bra024217.1-P	Field mustard	mitochondrion	33.53	29.65
Bra023586.1-P	Field mustard	mitochondrion	33.13	29.61
Bra029549.1-P	Field mustard	mitochondrion	33.93	29.53
Bra006374.1-P	Field mustard	plastid	32.94	28.92

Protein Annotations

MapMan:2.4.2.1.1	Gene3D:3.50.50.100	EnsemblPlantsGene:Bra022768	EnsemblPlants:Bra022768.1	EnsemblPlants:Bra022768.1-P	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016491	GO:GO:0031304	GO:GO:0055114	InterPro:IPR036188	UniProt:M4E1W8	PFAM:PF07992
PRINTS:PR00368	PANTHER:PTHR43706	PANTHER:PTHR43706:SF14	SUPFAM:SSF51905	UniParc:UPI00025401CE	:

Description

AT2G29990 (E=8e-269) NDA2 | NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2); FAD binding / NADH dehydrogenase/ oxidoreductase

Coordinates

chrA03:-:6937843..6940587

Molecular Weight (calculated)

55864.6 Da

IEP (calculated)

9.713

GRAVY (calculated)

-0.088

Length

504 amino acids

Sequence
(BLAST)

001: MFLIKNLRRI SPTTSSALIG FRNTGSPPLS SRFCTTLHQH QQVQSPAPNG LDRSRYEGLA PTREGEKPRV VVLGSGWAGC RLMKGIDTSI YDVVCVSPRN
101: HMVFTPLLAS TCVGTLEFRS VAEPISRIQP AISREPGSFF FLANCSRLDA DSHEVHCETL TDGLNTLKPW KFKIAYDKLV VACGAEASTF GIQGVLENAI
201: FLREVHHAQE IRRKLLLNLM LSDTPGISKE EKQRLLHCVV VGGGPTGVEF SGELSDFIMK DVRQRYAHVK DDVHVTLIEA KDILSSFDDR LRRYAIKQLN
301: KSGVRFVRGI VKDVKPQKLI LDDGTEVPYG LLVWSTGVGP SPFVSSLDLP KAPGGRIGID QWMRVPSVQD VFAIGDCSGY LETTGKPTLP ALAQVAEREG
401: KYLANLLNEI GKANGGRANS AKEIALGVPF VYKHLGSMAT IGRYKALVDL RESKDAKGIS MTGFVSWFIW RSAYLTRVIS WRNRFYVAIN WFTTFVFGRD
501: ISRI

Best Arabidopsis Sequence Match ( AT2G29990.1 )
(BLAST)

001: MFMIKNLTRI SPNTSSIITR FRNSGSSSLS YTLASRFCTA QETQIQSPAK IPNDVDRSQY SGLPPTREGE KPRVVVLGSG WAGCRLMKGI DTNLYDVVCV
101: SPRNHMVFTP LLASTCVGTL EFRSVAEPIS RIQPAISREP GSFFFLANCS RLDADAHEVH CETLTDGLNT LKPWKFKIAY DKLVIASGAE ASTFGIHGVM
201: ENAIFLREVH HAQEIRRKLL LNLMLSDTPG ISKEEKRRLL HCVVVGGGPT GVEFSGELSD FIMKDVRQRY AHVKDDIHVT LIEARDILSS FDDRLRRYAI
301: KQLNKSGVRF VRGIVKDVQS QKLILDDGTE VPYGLLVWST GVGPSPFVRS LGLPKDPTGR IGIDEWMRVP SVQDVFAIGD CSGYLETTGK PTLPALAQVA
401: EREGKYLANL LNAIGKGNGG RANSAKEIEL GVPFVYKHLG SMATIGRYKA LVDLRESKDA KGISMTGFVS WFIWRSAYLT RVISWRNRFY VAINWFTTFV
501: FGRDISRI

Arabidopsis Description

NDA2Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80874]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.