Factsheet for Bra029549.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16620	Canola	mitochondrion	100.0	100.0
CDY44749	Canola	mitochondrion	98.96	98.96
AT4G05020.2	Thale cress	mitochondrion	94.65	88.53
Solyc02g079170.2.1	Tomato	nucleus	75.99	75.34
PGSC0003DMT400057712	Potato	mitochondrion	75.99	75.34
KRH49945	Soybean	mitochondrion	74.27	74.14
KRH21576	Soybean	mitochondrion	73.58	73.96
KRH41931	Soybean	mitochondrion	73.75	73.62
KRH10751	Soybean	mitochondrion	73.23	73.61
TraesCS7D01G303500.1	Wheat	golgi	69.43	69.79
TraesCS7B01G206900.1	Wheat	mitochondrion	69.43	69.79
TraesCS7A01G306600.1	Wheat	mitochondrion	69.26	69.62
Bra006374.1-P	Field mustard	plastid	68.39	68.99
GSMUA_Achr4P33660_001	Banana	mitochondrion	68.74	68.74
Bra023586.1-P	Field mustard	mitochondrion	66.67	68.44
EES14522	Sorghum	mitochondrion	68.39	68.16
KRH62788	Soybean	cytosol	19.0	67.9
GSMUA_Achr3P22940_001	Banana	mitochondrion	67.01	67.01
Zm00001d049597_P001	Maize	mitochondrion	68.39	66.89
EES01568	Sorghum	mitochondrion	65.98	66.09
Zm00001d012615_P001	Maize	mitochondrion	65.98	66.09
TraesCS3B01G350200.1	Wheat	mitochondrion	64.94	65.96
Zm00001d043266_P002	Maize	mitochondrion	65.63	65.74
TraesCS3D01G314700.1	Wheat	mitochondrion	64.94	65.62
TraesCS3A01G316500.1	Wheat	mitochondrion	64.77	65.44
Os05t0331200-01	Rice	mitochondrion	63.9	64.35
Bra024217.1-P	Field mustard	mitochondrion	63.21	64.21
Os08t0141400-01	Rice	mitochondrion	38.69	62.75
GSMUA_Achr10P...	Banana	mitochondrion	66.49	39.37
Bra030676.1-P	Field mustard	plastid	30.05	34.46
Bra015560.1-P	Field mustard	mitochondrion	30.22	34.38
Bra022768.1-P	Field mustard	mitochondrion	29.53	33.93
Zm00001d004457_P001	Maize	mitochondrion	8.12	29.19
HORVU4Hr1G058410.1	Barley	nucleus	10.71	18.29

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	EnsemblPlantsGene:Bra029549	EnsemblPlants:Bra029549.1	EnsemblPlants:Bra029549.1-P	ncoils:Coil
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491
GO:GO:0031314	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188	UniProt:M4EL82	PFAM:PF00036
PFAM:PF07992	PRINTS:PR00368	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF5
SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI000254261C	SEG:seg	:

Description

AT4G05020 (E=9e-299) NDB2 | NDB2 (NAD(P)H dehydrogenase B2); FAD binding / disulfide oxidoreductase/ oxidoreductase

Coordinates

chrA09:-:17132811..17136213

Molecular Weight (calculated)

64904.5 Da

IEP (calculated)

8.122

GRAVY (calculated)

-0.336

Length

579 amino acids

Sequence
(BLAST)

001: MRRSFSFFER FSKAFQDYPS LSRIIVVSTI SGGGLIAYSE ANGTNGVVET GTKKKKVVLL GTGWAGTSFL KNLNNSQYEV QIISPRNYFA FTPLLPSVTC
101: GTVEARSVVE PIRNIGRKKN VDTSYLEAEC FKIDPASKKV FCRSKQGVSS GKKEEFSVDY DYLVIATGAQ SNTFNIPGVE ENCHFLKEVE DAQGIRKKVI
201: DSFEKASLPE LSEEERKRIL HFVVVGGGPT GVEFAAELHD FVTEDLVTLY PKAKDLVRIT LLEAADHILT MFDKRITEFA EEKFSRDGID VKLGSMVTKV
301: NEKDISAKTK GGEVSSIPYG MIVWSTGIGT RPVIKDFMKQ IGQGNRRALA TDEWLRVEGC DNIYALGDCA TINQRKVMED VSAIFSKADK DNSGTLTLKE
401: FQEAMDDICV RYPQVELYLK SKRMRGIADL LKEAEADDGS KKNIELKIEE FKSALSQVDS QVKFLPATAQ VAAQQGTYLA KCFDRMEECE KNPEGPIRMR
501: GEGRHRFRPF RYRHLGSFAP LGGEQTAAEL PGDWVSIGHS SQWLWYSVYA SKQVSWRTRV LVVSDWMRRF IFGRDSSSI

Best Arabidopsis Sequence Match ( AT4G05020.1 )
(BLAST)

001: MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP
101: SVTCGTVEAR SVVEPIRNIG RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP GVEENCHFLK EVEDAQRIRK
201: TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV
301: TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT
401: LKEFQEAMDD ICVRYPQVEL YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA YLAKCFDRME ECEKSPEGPI
501: RMRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWVSI GHSSQWLWYS VYASKQVSWR TRVLVVSDWM RRFIFGRDSS SI

Arabidopsis Description

NDB2NAD(P)H dehydrogenase B2 [Source:UniProtKB/TrEMBL;Acc:F4JGL5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.