Factsheet for GSMUA_Achr10P10110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22940_001	Banana	mitochondrion	50.31	84.97
GSMUA_Achr4P33660_001	Banana	mitochondrion	43.97	74.27
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	16.46	70.0
KRH49945	Soybean	mitochondrion	40.7	68.62
PGSC0003DMT400057712	Potato	mitochondrion	40.9	68.49
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	40.18	68.35
KRH41931	Soybean	mitochondrion	40.49	68.28
Solyc02g079170.2.1	Tomato	nucleus	40.7	68.15
KRH21576	Soybean	mitochondrion	39.88	67.71
KRH10751	Soybean	mitochondrion	39.88	67.71
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	14.72	67.61
KRH25488	Soybean	peroxisome	27.91	66.75
CDY44749	Canola	mitochondrion	39.47	66.67
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	39.47	66.55
CDY16620	Canola	mitochondrion	39.37	66.49
Bra029549.1-P	Field mustard	mitochondrion	39.37	66.49
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	33.84	65.81
KRH62788	Soybean	cytosol	10.63	64.2
Solyc07g054670.2.1	Tomato	unclear	37.73	64.17
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	36.71	62.43
CDY38082	Canola	mitochondrion	36.61	62.26
Bra023586.1-P	Field mustard	mitochondrion	35.79	62.06
AT4G05020.2	Thale cress	mitochondrion	39.06	61.71
AT2G20800.1	Thale cress	mitochondrion	36.61	61.51
CDX78714	Canola	plastid	36.09	61.5
Bra006374.1-P	Field mustard	plastid	35.99	61.32
CDX70722	Canola	plastid	35.89	61.26
GSMUA_Achr7P00100_001	Banana	mitochondrion	15.24	36.88
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	15.13	36.45
GSMUA_Achr5P28430_001	Banana	plastid	18.51	31.42

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G10110_001	EnsemblPlants:GSMUA_Achr10P10110_001
EnsemblPlants:GSMUA_Achr10T10110_001	InterPro:IPR002048	InterPro:IPR036188	UniProt:M0RGY7	PFAM:PF07992	PRINTS:PR00368
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	SUPFAM:SSF47473	SUPFAM:SSF51905
UniParc:UPI0002969AFC	SEG:seg	:	:	:	:

Description

Putative Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G10110_001]

Coordinates

chr10:-:19736935..19747056

Molecular Weight (calculated)

110180.0 Da

IEP (calculated)

8.324

GRAVY (calculated)

-0.446

Length

978 amino acids

Sequence
(BLAST)

001: MRFISNNFDI LSVRKKKCFL HPFGHSTCIK NYEMLIAIRL RDEKPKDALP ALPVRPTLRR RPPSSRNSLP MAFKGGSMAE CSSSGPDPAK DKARPERREF
101: SNGSSVKDRS EKVNHLEAEE LVNYEEVPGK SIVSQSSMAG PVDEKLGHGT RNGFVEEEAS KEDGQKVHPS RVDDLENLVL KTKAELRQKE EENVALLKQV
201: QQCEKKWSLF EVKLKSMEEM YQTQIDTLKV NLAAAQNSIA AGDTVKQPLK FEGAMSAEAQ TPEETPIKHH VAESTVLDGR NNVVHHLTKE FEQQKQVFED
301: EACVLSEVNS GQSGSVAKSI EELRNLTIRY EAWKKEYKVR LRDAKASLLK LGKPEGEKSR RRWWEIDELK PALFDGEHFA LSTSLGSSSR SLSIDRLLQR
401: WRMRSATFFL DGAFRRSPAF SKLVLIFAAS GGGLVAYADA RTDPAAEPSQ TAPKKKMVVL GTGWAGTTFV RNVDSSLYDV QVISPRNYFA FTPLLPSVTC
501: GTVEPRSIVE PIRKIIRKKG GEIKFWEAEC FKIDPDNKKV HCRTNIGTNL EGNGEFLVDY DYLVIAVGAR VNTFNTSGVV QHCHFLKEVE DAQKIRKSVI
601: DSFERAILPD LDEEERKRTL HFVIVGGGPT GVEFAAELHD FISEDLAKLY PTVCNLVKIS VIEHGGHILT MFDKRIGKFA EEKFRRDGIE LRTGYRVVKV
701: SDNIITMEDK LHVETSVSYG MAVWSAGVGA RPIILDFMKQ IGQGNRRALA TDEWLRVREC DGVYAIGDCA TMSQRKVMED ILEIFKFADK DNSGTLTVKE
801: INDALEDICI RYPQVELYLK SNQMSNIVDL IKASKGDVGK ESVELDIEEF KNALADVDSE VKNLPATAQV AAQQGNYLAS CFNRMKRCEK KPEGPLRIRE
901: LGRHRFRPFR YKHLGQFAPL GGEQTAAQLP GDWISIGHSS QWLWYSVYAS KQVSWRTRAL VISDWTRRFI HGRDSSCI

Best Arabidopsis Sequence Match ( AT4G21490.1 )
(BLAST)

001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI

Arabidopsis Description

NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.