Factsheet for VIT_00s2648g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	83.04	89.67
Os08t0141400-01	Rice	mitochondrion	71.3	45.94
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	82.17	32.87
VIT_12s0057g00260.t01	Wine grape	mitochondrion, plasma membrane	77.39	30.85
GSMUA_Achr3P22940_001	Banana	mitochondrion	76.09	30.22
GSMUA_Achr4P33660_001	Banana	mitochondrion	72.61	28.84
TraesCS7D01G303500.1	Wheat	golgi	71.74	28.65
TraesCS7B01G206900.1	Wheat	mitochondrion	71.74	28.65
TraesCS7A01G306600.1	Wheat	mitochondrion	71.3	28.47
EES14522	Sorghum	mitochondrion	71.74	28.4
Zm00001d043266_P002	Maize	mitochondrion	70.87	28.2
Os05t0331200-01	Rice	mitochondrion	70.43	28.17
Zm00001d012615_P001	Maize	mitochondrion	70.43	28.03
TraesCS3D01G314700.1	Wheat	mitochondrion	69.57	27.92
TraesCS3A01G316500.1	Wheat	mitochondrion	69.57	27.92
TraesCS3B01G350200.1	Wheat	mitochondrion	69.13	27.89
EES01568	Sorghum	mitochondrion	70.0	27.85
Zm00001d049597_P001	Maize	mitochondrion	70.0	27.2
VIT_06s0004g06760.t01	Wine grape	plastid	41.74	19.24
VIT_19s0027g01030.t01	Wine grape	cytosol	23.91	18.58
VIT_00s0301g00090.t01	Wine grape	mitochondrion	43.91	18.5
GSMUA_Achr10P...	Banana	mitochondrion	70.0	16.46
Zm00001d004457_P001	Maize	mitochondrion	0.87	1.24

Protein Annotations

EntrezGene:100241384	wikigene:100241384	MapMan:2.4.2.1.2	Gene3D:3.50.50.100	ProteinID:CBI33303	ProteinID:CBI33303.3
UniProt:D7TS31	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	EMBL:FN596201	GO:GO:0003674	GO:GO:0003824
GO:GO:0003955	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0019646
GO:GO:0055114	InterPro:IPR036188	EntrezGene:LOC100241384	wikigene:LOC100241384	PFAM:PF07992	PRINTS:PR00368
PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	SUPFAM:SSF51905	UniParc:UPI0001BE3EDE	ArrayExpress:VIT_00s2648g00010	EnsemblPlantsGene:VIT_00s2648g00010
EnsemblPlants:VIT_00s2648g00010.t01	RefSeq:XP_003635673	RefSeq:XP_003635673.1	:	:	:

Description

No Description!

Coordinates

chrUn:-:42595342..42597305

Molecular Weight (calculated)

25871.8 Da

IEP (calculated)

5.407

GRAVY (calculated)

-0.240

Length

230 amino acids

Sequence
(BLAST)

001: VRSLGSSEDD NKKKRVVVLG TGWAGTSFLK NLNNSSYDVQ VVSPRNYFAF TPLLPSVTCG SVEARSIVEP IRNIVKKKNV EIHFWEAECI KIDAENKKVY
101: CKSSQDTNLN GEEEFVVDYD YLVIAMGARS NTFNTPGVVE NCHFLKEVED AQRIRRSVID CFERASLPNL TDEERKRILH FVVVGGGPTG VEFSAELHDF
201: VNEDLVKLYP TVKDLVKITL LEAGDHILNM

Best Arabidopsis Sequence Match ( AT4G21490.1 )
(BLAST)

001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI

Arabidopsis Description

NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.