Factsheet for Zm00001d043266_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012615_P001	Maize	mitochondrion	95.16	95.16
EES01568	Sorghum	mitochondrion	94.98	94.98
TraesCS3D01G314700.1	Wheat	mitochondrion	86.85	87.61
TraesCS3A01G316500.1	Wheat	mitochondrion	86.68	87.43
TraesCS3B01G350200.1	Wheat	mitochondrion	85.99	87.19
Os05t0331200-01	Rice	mitochondrion	86.51	86.96
HORVU3Hr1G076920.2	Barley	mitochondrion	86.85	82.16
GSMUA_Achr4P33660_001	Banana	mitochondrion	73.18	73.06
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	28.2	70.87
KRH25488	Soybean	peroxisome	48.79	68.95
Zm00001d049597_P001	Maize	mitochondrion	69.9	68.24
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	66.95	67.3
KRH41931	Soybean	mitochondrion	66.44	66.21
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.39	66.2
KRH49945	Soybean	mitochondrion	66.09	65.86
KRH21576	Soybean	mitochondrion	65.57	65.8
PGSC0003DMT400057712	Potato	mitochondrion	66.44	65.75
CDY16620	Canola	mitochondrion	65.74	65.63
Bra029549.1-P	Field mustard	mitochondrion	65.74	65.63
KRH10751	Soybean	mitochondrion	65.4	65.62
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	57.09	65.61
Solyc02g079170.2.1	Tomato	nucleus	66.26	65.58
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	65.74	65.52
CDY44749	Canola	mitochondrion	65.4	65.28
Solyc07g054670.2.1	Tomato	unclear	64.71	65.04
CDY38082	Canola	mitochondrion	61.94	62.26
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	61.94	62.26
Bra023586.1-P	Field mustard	mitochondrion	60.73	62.23
CDX78714	Canola	plastid	61.76	62.2
AT2G20800.1	Thale cress	mitochondrion	62.46	62.03
Bra006374.1-P	Field mustard	plastid	61.59	62.02
CDX70722	Canola	plastid	61.42	61.95
AT4G05020.2	Thale cress	mitochondrion	65.92	61.55
KRH62788	Soybean	cytosol	16.78	59.88
Zm00001d036557_P002	Maize	mitochondrion	63.15	59.35
Zm00001d037405_P001	Maize	endoplasmic reticulum, extracellular	15.22	53.01
Zm00001d012464_P001	Maize	mitochondrion	29.41	32.38
Zm00001d004457_P001	Maize	mitochondrion	8.13	29.19
Zm00001d021804_P001	Maize	mitochondrion	28.2	26.94

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	UniProt:A0A1D6N9U7	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188	ProteinID:ONM37318.1
ProteinID:ONM37319.1	PFAM:PF07992	PRINTS:PR00368	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3
SUPFAM:SSF47473	SUPFAM:SSF51905	UniParc:UPI00022077F8	EnsemblPlantsGene:Zm00001d043266	EnsemblPlants:Zm00001d043266_P002	EnsemblPlants:Zm00001d043266_T002

Description

External alternative NAD(P)H-ubiquinone oxidoreductase B4 mitochondrial

Coordinates

chr3:-:193802467..193808484

Molecular Weight (calculated)

65318.4 Da

IEP (calculated)

9.379

GRAVY (calculated)

-0.331

Length

578 amino acids

Sequence
(BLAST)

001: MASNGMSLVH RAAEAVRRTP RWKKRLVLFA VGASTLTYAC QDNRVLQICD GTGNKKKVVI LGTGWAGASF LRNIDTSLYD VHVVSPRNYF TFTPLLPSVT
101: CGTVEARSIV EPIRNIVRKR NGSFRFWEAE CIKIDPRNKK VHCRSDVGTN INGNGEFVVD YDYLIVSIGA RPNTFNTPGV TENCHFLKEV EDAQKIRKSV
201: MKCFERAALP NLSEEERKKN LHFVVIGGGP TGVEFAAELH DFVNADLAKL YPDVKKYVNI SVIEAGGHIL TMFDKRITEF AEEKFKRDGI DLKTNFKVVK
301: VSDKDITMTN PATGEVAVPY GMAVWSTGIG TRPIILDFMK QVGQENRRVL ATDEWLRVQG CEDVYALGDC ATIAQRKVME DVASIFRVAD KDNSGTLTVK
401: KIKDVLGDIY ERYPQVELYL KSNQMKSFHE LLKDSDGNSK ELKELNIEQF KKALAQVDSQ VKMLPATAQV AAQEGSYLAD CFNRMKTCEQ YPEGPIRIRG
501: AGRHRFKPFR YRHLGQFAPL GGEQTAYQLP GDWVHVGHST QWLWYSVYAS KQFSWRTRML VISDWGRRFI FGRDSSSI

Best Arabidopsis Sequence Match ( AT4G21490.1 )
(BLAST)

001: MRPFAYFERL SQAFHDYPSL SKILVVSTIS GGGLIVYSEA NPSYSNNGVE TKTRKRKVVL LGTGWAGASF LKTLNNSSYE VQVISPRNYF AFTPLLPSVT
101: CGTVEARSVV EPIRNIARKQ NVEMSFLEAE CFKIDPGSKK VYCRSKQGVN SKGKKEFDVD YDYLVIATGA QSNTFNIPGV EENCHFLKEV EDAQRIRSTV
201: IDSFEKASLP GLNEQERKRM LHFVVVGGGP TGVEFASELH DFVNEDLVKL YPKAKNLVQI TLLEAADHIL TMFDKRITEF AEEKFTRDGI DVKLGSMVVK
301: VNDKEISAKT KAGEVSTIPY GMIVWSTGIG TRPVIKDFMK QIGQGNRRAL ATDEWLRVEG CDNIYALGDC ATINQRKVME DIAAIFKKAD KENSGTLTMK
401: EFHEVMSDIC DRYPQVELYL KSKGMHGITD LLKQAQAENG SNKSVELDIE ELKSALCQVD SQVKLLPATG QVAAQQGTYL AKCFDRMEVC EKNPEGPIRI
501: RGEGRHRFRP FRYRHLGQFA PLGGEQTAAQ LPGDWVSIGH SSQWLWYSVY ASKQVSWRTR VLVVSDWMRR FIFGRDSSRI

Arabidopsis Description

NDB3External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJJ3]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.