Factsheet for TraesCS3B01G350200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G314700.1	Wheat	mitochondrion	99.12	98.6
TraesCS3A01G316500.1	Wheat	mitochondrion	98.77	98.25
HORVU3Hr1G076920.2	Barley	mitochondrion	96.14	89.69
Os05t0331200-01	Rice	mitochondrion	89.12	88.35
Zm00001d043266_P002	Maize	mitochondrion	87.19	85.99
Zm00001d012615_P001	Maize	mitochondrion	86.84	85.64
EES01568	Sorghum	mitochondrion	86.67	85.47
GSMUA_Achr4P33660_001	Banana	mitochondrion	73.86	72.71
TraesCS7B01G206900.1	Wheat	mitochondrion	71.23	70.49
VIT_00s2648g00010.t01	Wine grape	mitochondrion, peroxisome, plastid	27.89	69.13
KRH25488	Soybean	peroxisome	48.25	67.24
VIT_12s0057g00250.t01	Wine grape	mitochondrion, peroxisome, plastid	67.54	66.96
KRH21576	Soybean	mitochondrion	66.14	65.45
KRH56038	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	57.54	65.21
KRH10751	Soybean	mitochondrion	65.79	65.1
CDY16620	Canola	mitochondrion	65.96	64.94
Bra029549.1-P	Field mustard	mitochondrion	65.96	64.94
KRH41931	Soybean	mitochondrion	65.96	64.83
CDY44749	Canola	mitochondrion	65.61	64.59
Solyc07g054670.2.1	Tomato	unclear	65.09	64.52
KRH49945	Soybean	mitochondrion	65.61	64.48
AT4G21490.1	Thale cress	cytosol, mitochondrion, peroxisome	65.61	64.48
PGSC0003DMT400057712	Potato	mitochondrion	65.96	64.38
VIT_00s2376g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.04	64.32
Solyc02g079170.2.1	Tomato	nucleus	65.79	64.21
Bra023586.1-P	Field mustard	mitochondrion	62.11	62.77
CDY38082	Canola	mitochondrion	63.16	62.61
CDX85484	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	63.16	62.61
TraesCS7B01G348600.1	Wheat	mitochondrion, peroxisome	64.04	62.39
CDX78714	Canola	plastid	62.81	62.37
CDX70722	Canola	plastid	62.63	62.3
Bra006374.1-P	Field mustard	plastid	62.63	62.2
AT2G20800.1	Thale cress	mitochondrion	62.63	61.34
KRH62788	Soybean	cytosol	17.37	61.11
AT4G05020.2	Thale cress	mitochondrion	66.32	61.07
TraesCS3B01G115600.1	Wheat	cytosol, mitochondrion, peroxisome	17.02	42.92
TraesCS3B01G604700.1	Wheat	cytosol, mitochondrion, peroxisome	16.67	42.6
TraesCS3B01G382500.1	Wheat	mitochondrion	28.6	32.53
TraesCS2B01G230300.1	Wheat	plastid	30.88	31.43

Protein Annotations

MapMan:2.4.2.1.2	Gene3D:3.50.50.100	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	PFscan:PS50222	PANTHER:PTHR43706	PANTHER:PTHR43706:SF3	SUPFAM:SSF47473	SUPFAM:SSF51905
EnsemblPlantsGene:TraesCS3B01G350200	EnsemblPlants:TraesCS3B01G350200.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:560423463..560427833

Molecular Weight (calculated)

64032.8 Da

IEP (calculated)

9.095

GRAVY (calculated)

-0.297

Length

570 amino acids

Sequence
(BLAST)

001: MSTGGASLVR RALEAVRRTP RWQKRLVVLT AGAGTLSYAC QDNRVLQISD GTGGKKKVVI LGTGWAGASF LRNIDTSLYD VHVVSPRNYF MFTPLLPSVT
101: CGTVEARSIV EPIRNIVRKR GGAFRFWEAE CYKIDPTSKK VHCKSGDADA NGEFVVDYDY LVVTVGAKPN TFNTPGVAEN CHFLKEVEDA QKIRKSVMKC
201: FERAALPNLT DEERKKNVHF VVIGGGPTGV EFAAELHDFV NEDLAKLYPD VKKYVNISVI EAGEHILTMF DKRITHFAED KFKRTGIDLK TNFMVVKVSD
301: KTITMSNPTT GEIAVPYGLA VWSTGIGTRP IIMDFMKQVG QANRRVLATD EWLRVLGCDN VYALGDCATI SQRKVMEDVD SIFRVADKDN SGTLSVKNIK
401: NVLGDIYQRY PQVELYLKTN QMKGFHDLLK DKETEELNIE EFKKALAQVD SQVKMLPATA QVAAQEGAYL ADCFNRMNTC EENPEGPLRI RGAGRHRFKP
501: FRYRHLGQFA PLGGEQTAAQ LPGDWVHVGH STQWLWYSVY ASKQFSWRTR MLVVTDWGRR FFFGRDSSSL

Best Arabidopsis Sequence Match ( AT2G20800.1 )
(BLAST)

001: MSFHSFYQRA SSLFKAYPST SKILLLSTFS GGGGVLVYSD SNPLKRILHA DATLDSDGNP IRKKKVVVLG SGWSGYSFLS YLNNPNYDVQ VVSPRNFFLF
101: TPLLPSVTNG TVEARSIVEP IRGLMRKKGF EYKEAECVKI DASNKKIHCR SKEGSSLKGT TEFDMDYDIL ILAVGAKPNT FNTPGVEEHA YFLKEAEDAL
201: NIRHSVIDCF ERASLPNLTE EERKKILHFV VVGGGPTGVE FSAELHDFLV QDVAKIYPKV QEFTKITLLE AGDHILNMFD KRITAFAEEK FQRDGIDLKT
301: GSMVVGVTAD EISTKERETG KIVSEPYGMV VWSTGIGSRP VIKDFMQQIG QGQRRVLATD EWLRVEGCDG VYALGDTATI NQRRVMEDIA AIFNKADKGN
401: TGTLKKKDFN SVVKDICQRY PQVELYLKKN KLKNIANLLK SANGEDTQVN IEKFKQALSE VDSQMKNLPA TAQVASQQGK YLAKCFNKME KCEKKPEGPL
501: RFRGEGRHRF QPFRYRHFGS FAPLGGEQTA AELPGDWVSI GHSSQWLWYS VYASKLVSWR TRMLVISDWT RRFVFGRDSS SI

Arabidopsis Description

NDB4External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.